RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 USP4Q13107 963 aa20.02■□□□□ 0.8
CPSF2-203ENST00000554290 SRSF5Q13243 272 aaKnown RBP20.02■□□□□ 0.8
CPSF2-203ENST00000554290 MDH1BQ5I0G3 518 aa20.02■□□□□ 0.8
CPSF2-203ENST00000554290 CHFRQ96EP1 664 aa20.02■□□□□ 0.8
CPSF2-203ENST00000554290 MRPL45Q9BRJ2 306 aaKnown RBP20.02■□□□□ 0.8
CPSF2-203ENST00000554290 ARHGAP26Q9UNA1 814 aa20.02■□□□□ 0.8
CPSF2-203ENST00000554290 FOXD2O60548 495 aaPredicted RBP20.01■□□□□ 0.79
CPSF2-203ENST00000554290 RNF40O75150 1001 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 STAU1O95793 577 aaKnown RBP20.01■□□□□ 0.79
CPSF2-203ENST00000554290 EGFP01133 1207 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 TCF3P15923 654 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 PTPN1P18031 435 aaKnown RBP20.01■□□□□ 0.79
CPSF2-203ENST00000554290 NOP14P78316 857 aaKnown RBP20.01■□□□□ 0.79
CPSF2-203ENST00000554290 CUL4BQ13620 913 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 PKN3Q6P5Z2 889 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 SYAP1Q96A49 352 aaPredicted RBP20.01■□□□□ 0.79
CPSF2-203ENST00000554290 C8orf48Q96LL4 319 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 RTKNQ9BST9 563 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 SEMA4GQ9NTN9 838 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 WNT6Q9Y6F9 365 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 DENND4CQ5VZ89 1909 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 DCHS1Q96JQ0 3298 aa20.01■□□□□ 0.79
CPSF2-203ENST00000554290 KIF26AQ9ULI4 1882 aaPredicted RBP20.01■□□□□ 0.79
CPSF2-203ENST00000554290 A8MXQ7 604 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 F8VP50 259 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 AP3M2P53677 418 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 ATXN1P54253 815 aaKnown RBP20■□□□□ 0.79
CPSF2-203ENST00000554290 MYL6P60660 151 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 CSRP2Q16527 193 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 EML3Q32P44 896 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 CAMKK1Q8N5S9 505 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 CCDC26Q8TAB7 109 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 ZNF516Q92618 1163 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 CD101Q93033 1021 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 TTLL2Q9BWV7 592 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 ELOVL4Q9GZR5 314 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 FBRSL1Q9HCM7 1045 aaKnown RBP20■□□□□ 0.79
CPSF2-203ENST00000554290 NXF1Q9UBU9 619 aaKnown RBP20■□□□□ 0.79
CPSF2-203ENST00000554290 RCOR1Q9UKL0 485 aa20■□□□□ 0.79
CPSF2-203ENST00000554290 NFATC1O95644 943 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 SLFN14P0C7P3 912 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 USP46P62068 366 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 TDRD10Q5VZ19 366 aaKnown RBP19.99■□□□□ 0.79
CPSF2-203ENST00000554290 FAM160A2Q8N612 972 aaPredicted RBP19.99■□□□□ 0.79
CPSF2-203ENST00000554290 GAB3Q8WWW8 586 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 SLITRK1Q96PX8 696 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 LINC00597Q9H2U6 94 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 SERTAD1Q9UHV2 236 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 CEP250Q9BV73 2442 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 OBSL1O75147 1896 aa19.99■□□□□ 0.79
CPSF2-203ENST00000554290 ZNF638Q14966 1978 aaKnown RBP19.98■□□□□ 0.79
CPSF2-203ENST00000554290 RPP40O75818 363 aaKnown RBP19.98■□□□□ 0.79
CPSF2-203ENST00000554290 HOXC13P31276 330 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 PXNP49023 591 aaPredicted RBP19.98■□□□□ 0.79
CPSF2-203ENST00000554290 DNM1Q05193 864 aaKnown RBP19.98■□□□□ 0.79
CPSF2-203ENST00000554290 PSMD2Q13200 908 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 BIRC3Q13489 604 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 CACNA2D4Q7Z3S7 1137 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 GRAMD1CQ8IYS0 662 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 KIAA1958Q8N8K9 716 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 B3GALNT2Q8NCR0 500 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 NETO1Q8TDF5 533 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 GZF1Q9H116 711 aaPredicted RBP19.98■□□□□ 0.79
CPSF2-203ENST00000554290 XYLT2Q9H1B5 865 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 DPEP3Q9H4B8 488 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 EXOC1Q9NV70 894 aa19.98■□□□□ 0.79
CPSF2-203ENST00000554290 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.98■□□□□ 0.79
CPSF2-203ENST00000554290 ZNF840PA6NDX5 716 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 LEFTY2O00292 366 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 CLSTN1O94985 981 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 ABL1P00519 1130 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 CCDC192P0DO97 292 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 SLC7A9P82251 487 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 PRR23CQ6ZRP0 262 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 PARD3BQ8TEW8 1205 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 ACDQ96AP0 544 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 LOXL4Q96JB6 756 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 B3GNT5Q9BYG0 378 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 VRTNQ9H8Y1 702 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 NME7Q9Y5B8 376 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 ATP8B3O60423 1300 aa19.97■□□□□ 0.79
CPSF2-203ENST00000554290 SLC9A3R1O14745 358 aaPredicted RBP19.96■□□□□ 0.79
CPSF2-203ENST00000554290 AKAP3O75969 853 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 RTN3O95197 1032 aaPredicted RBP19.96■□□□□ 0.79
CPSF2-203ENST00000554290 CASP4P49662 377 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 TAF10Q12962 218 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 NCOA4Q13772 614 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 ZNF699Q32M78 642 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 ZNF667Q5HYK9 610 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 NAIF1Q69YI7 327 aaPredicted RBP19.96■□□□□ 0.79
CPSF2-203ENST00000554290 SYT13Q7L8C5 426 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 SLC9A9Q8IVB4 645 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 SPRYD3Q8NCJ5 442 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 PDZD8Q8NEN9 1154 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 RPLP0P6Q8NHW5 317 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 PAGE5Q96GU1 130 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 TNIP3Q96KP6 325 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 ZNF518BQ9C0D4 1074 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 RNF38Q9H0F5 515 aa19.96■□□□□ 0.79
CPSF2-203ENST00000554290 USP25Q9UHP3 1055 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms