RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 PPP6R2O75170 966 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 ALDH1A2O94788 518 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 PDIA4P13667 645 aaKnown RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 TNNI1P19237 187 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 KCNA4P22459 653 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 GNL1P36915 607 aaPredicted RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 PSMC1P62191 440 aaKnown RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 SLC7A9P82251 487 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 SNRNP35Q16560 246 aaKnown RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 HSF5Q4G112 596 aaPredicted RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 PREPLQ4J6C6 727 aaPredicted RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 STPG1Q5TH74 334 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 TDRD10Q5VZ19 366 aaKnown RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 LMBRD2Q68DH5 695 aaPredicted RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 CNNM4Q6P4Q7 775 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 TRAPPC11Q7Z392 1133 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 CBWD2Q8IUF1 395 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 OR5B17Q8NGF7 314 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 ZNF396Q96N95 335 aaPredicted RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 SLC22A12Q96S37 553 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 TRIM9Q9C026 710 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 FBRSL1Q9HCM7 1045 aaKnown RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 KBTBD4Q9NVX7 518 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 ATP8B3O60423 1300 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 HELZP42694 1942 aaKnown RBP18.37■□□□□ 0.53
SEC23A-206ENST00000553970 ATG2BQ96BY7 2078 aa18.37■□□□□ 0.53
SEC23A-206ENST00000553970 STX6O43752 255 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 DLATP10515 647 aaKnown RBP18.36■□□□□ 0.53
SEC23A-206ENST00000553970 LMO2P25791 158 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 EIF2DP41214 584 aaKnown RBP18.36■□□□□ 0.53
SEC23A-206ENST00000553970 DGKEP52429 567 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 ASIC1P78348 528 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 TRPC3Q13507 836 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 FAM26FQ5R3K3 315 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 RNF43Q68DV7 783 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 FAM173BQ6P4H8 233 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 PDZD8Q8NEN9 1154 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 PCED1BQ96HM7 432 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 CGRRF1Q99675 332 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 FGFBP2Q9BYJ0 223 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 CRTAC1Q9NQ79 661 aa18.36■□□□□ 0.53
SEC23A-206ENST00000553970 A0A087X0B3 334 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 LEFTY2O00292 366 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 SPTLC2O15270 562 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 ATP2C2O75185 946 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 RTN3O95197 1032 aaPredicted RBP18.35■□□□□ 0.53
SEC23A-206ENST00000553970 STAU1O95793 577 aaKnown RBP18.35■□□□□ 0.53
SEC23A-206ENST00000553970 CAVIN2O95810 425 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 ADH1CP00326 375 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 PDGFRBP09619 1106 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 ATICP31939 592 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 GBP1P32455 592 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 MRPS21P82921 87 aaKnown RBP18.35■□□□□ 0.53
SEC23A-206ENST00000553970 CREB5Q02930 508 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 PSMD6Q15008 389 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 ST3GAL2Q16842 350 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 XXYLT1Q8NBI6 393 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 LINC00301Q8NCQ3 95 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 OR6B3Q8NGW1 331 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 ZNF507Q8TCN5 953 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 OVCA2Q8WZ82 227 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 SYAP1Q96A49 352 aaPredicted RBP18.35■□□□□ 0.53
SEC23A-206ENST00000553970 DUSP15Q9H1R2 295 aaPredicted RBP18.35■□□□□ 0.53
SEC23A-206ENST00000553970 TBC1D14Q9P2M4 693 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 MTMR6Q9Y217 621 aa18.35■□□□□ 0.53
SEC23A-206ENST00000553970 PTPRJQ12913 1337 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 CHD8Q9HCK8 2581 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 ZNF840PA6NDX5 716 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.34■□□□□ 0.53
SEC23A-206ENST00000553970 F8VP50 259 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 TM4SF5O14894 197 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 WDR72Q3MJ13 1102 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 MDH1BQ5I0G3 518 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 DAB2IPQ5VWQ8 1189 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 NUDT18Q6ZVK8 323 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 GOLGA5Q8TBA6 731 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 USP33Q8TEY7 942 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 OTUB2Q96DC9 234 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 CNOT6LQ96LI5 555 aaKnown RBP18.34■□□□□ 0.53
SEC23A-206ENST00000553970 LSM14BQ9BX40 385 aaKnown RBP18.34■□□□□ 0.53
SEC23A-206ENST00000553970 AGPAT3Q9NRZ7 376 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 MMP17Q9ULZ9 603 aa18.34■□□□□ 0.53
SEC23A-206ENST00000553970 EML5Q05BV3 1969 aa18.33■□□□□ 0.53
SEC23A-206ENST00000553970 PTPRDP23468 1912 aa18.33■□□□□ 0.53
SEC23A-206ENST00000553970 KMT2BQ9UMN6 2715 aaPredicted RBP18.33■□□□□ 0.53
SEC23A-206ENST00000553970 BCLAF3A2AJT9 711 aaKnown RBP18.33■□□□□ 0.52
SEC23A-206ENST00000553970 HCRTO43612 131 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 YEATS4O95619 227 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 OLFM2O95897 454 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 ABL1P00519 1130 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 PTPN1P18031 435 aaKnown RBP18.33■□□□□ 0.52
SEC23A-206ENST00000553970 TRIM21P19474 475 aaKnown RBP18.33■□□□□ 0.52
SEC23A-206ENST00000553970 DPP6P42658 865 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 AP3M2P53677 418 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 SHC2P98077 582 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 CYP24A1Q07973 514 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 BYSLQ13895 437 aaKnown RBP18.33■□□□□ 0.52
SEC23A-206ENST00000553970 CCDC6Q16204 474 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 E2F4Q16254 413 aa18.33■□□□□ 0.52
SEC23A-206ENST00000553970 CCDC142Q17RM4 750 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms