RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 MRNIPQ6NTE8 343 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 IPO4Q8TEX9 1081 aaKnown RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 CACTINQ8WUQ7 758 aaKnown RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 TMEM171Q8WVE6 324 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 LENG9Q96B70 501 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 ZNF668Q96K58 619 aaPredicted RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 ZNF341Q9BYN7 854 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 SLC25A32Q9H2D1 315 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 GBA2Q9HCG7 927 aaPredicted RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 RGL1Q9NZL6 768 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 TMOD4Q9NZQ9 345 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 LRFN1Q9P244 771 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 DNMT3BQ9UBC3 853 aaKnown RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 HPSEQ9Y251 543 aa4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 MORC2Q9Y6X9 1032 aaPredicted RBP4.28□□□□□ -1.72
EFCAB11-204ENST00000553871 CENPVL1A0A0U1RR11 272 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 GOLGA6L3A6NEY3 463 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 PPM1DO15297 605 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 CD3EAPO15446 510 aaKnown RBP4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 PEX1O43933 1283 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 TLR5O60602 858 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 SNX2O60749 519 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 CSTBP04080 98 aaKnown RBP4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 YY1P25490 414 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 ZFP36P26651 326 aaKnown RBP4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 GABRB3P28472 473 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 ADORA2AP29274 412 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 PGDP52209 483 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 DGCR2P98153 550 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 GPS1Q13098 491 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 FOXE3Q13461 319 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 CCNIQ14094 377 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 RAB30Q15771 203 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 PTCHD3Q3KNS1 767 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 LSM12Q3MHD2 195 aaKnown RBP4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 ARL6IP4Q66PJ3 421 aaKnown RBP4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 KRT73Q86Y46 540 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 CERS3Q8IU89 383 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 ARHGEF19Q8IW93 802 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 CCDC28AQ8IWP9 274 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 LCORLQ8N3X6 602 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 ATG16L2Q8NAA4 619 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 GLIS1Q8NBF1 620 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 CYP2W1Q8TAV3 490 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 ATG4AQ8WYN0 398 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 FKBP10Q96AY3 582 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 GRAMD1AQ96CP6 724 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 C18orf8Q96DM3 657 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 FBXL20Q96IG2 436 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 HERPUD2Q9BSE4 406 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 PCDHAC1Q9H158 963 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 GLOD4Q9HC38 313 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 ZBTB26Q9HCK0 441 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 NECTIN3Q9NQS3 549 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 SLC2A4RGQ9NR83 387 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 DNAJB11Q9UBS4 358 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 DKK4Q9UBT3 224 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 ZMYND8Q9ULU4 1186 aaPredicted RBP4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 CAPN11Q9UMQ6 739 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 USP22Q9UPT9 525 aa4.27□□□□□ -1.73
EFCAB11-204ENST00000553871 A0A087WZ62 844 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 PIP5K1BO14986 540 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 PLSCR1O15162 318 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 CSF1RP07333 972 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 SRGNP10124 158 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 HGFP14210 728 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 EGR1P18146 543 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 EPHA3P29320 983 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 HALP42357 657 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 NXPH1P58417 271 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 BLOC1S1P78537 153 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 PFKFB4Q16877 469 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 ZACNQ401N2 412 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 PRR16Q569H4 304 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 ABHD17BQ5VST6 288 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 GPR149Q86SP6 731 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 GATAD2AQ86YP4 633 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 MYCT1Q8N699 235 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 SPATA5Q8NB90 893 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 MYCBPAPQ8TBZ2 947 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 ASB10Q8WXI3 467 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 LPIN2Q92539 896 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 SCLT1Q96NL6 688 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 HIST1H2AAQ96QV6 131 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 RMDN3Q96TC7 470 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 PRPF18Q99633 342 aaKnown RBP4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 AIFM2Q9BRQ8 373 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 PAGR1Q9BTK6 254 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 AMBRA1Q9C0C7 1298 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 OBP2BQ9NPH6 170 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 KCTD5Q9NXV2 234 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 CCNL1Q9UK58 526 aaPredicted RBP4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 SSX2IPQ9Y2D8 614 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 SNX14Q9Y5W7 946 aa4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 ARID1BQ8NFD5 2236 aaPredicted RBP4.26□□□□□ -1.73
EFCAB11-204ENST00000553871 AQP12BA6NM10 295 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 LGALS16A8MUM7 142 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 PSMD9O00233 223 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms