RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RWDD2AQ9UIY3 292 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 CDH22Q9UJ99 828 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 GTF3C4Q9UKN8 822 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 CDH7Q9ULB5 785 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 ATG2AQ2TAZ0 1938 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 TRIP11Q15643 1979 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 PDCD11Q14690 1871 aaKnown RBP8.88□□□□□ -0.99
PSEN1-209ENST00000553855 GABRDO14764 452 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 PAPLNO95428 1278 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 TPM2P07951 284 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 CSH1P0DML2 217 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 CSH2P0DML3 217 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 NPR3P17342 541 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 CDC25CP30307 473 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 GRIK1P39086 918 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 NLRP12P59046 1061 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 NOP14P78316 857 aaKnown RBP8.88□□□□□ -0.99
PSEN1-209ENST00000553855 NTHL1P78549 312 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 PTPN21Q16825 1174 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 CT47A1Q5JQC4 288 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-209ENST00000553855 CYP2U1Q7Z449 544 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 UBALD2Q8IYN6 164 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 FAXDC2Q96IV6 333 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 MRPL45Q9BRJ2 306 aaKnown RBP8.88□□□□□ -0.99
PSEN1-209ENST00000553855 MED10Q9BTT4 135 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 SRRTQ9BXP5 876 aaKnown RBP8.88□□□□□ -0.99
PSEN1-209ENST00000553855 NIF3L1Q9GZT8 377 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 CYP3A43Q9HB55 503 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 ETNK1Q9HBU6 452 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 AVENQ9NQS1 362 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-209ENST00000553855 HCFC1R1Q9NWW0 138 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 RAB20Q9NX57 234 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 GDE1Q9NZC3 331 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 EPS15L1Q9UBC2 864 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 UXTQ9UBK9 157 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-209ENST00000553855 MUTYHQ9UIF7 546 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 SORCS3Q9UPU3 1222 aa8.88□□□□□ -0.99
PSEN1-209ENST00000553855 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.88□□□□□ -0.99
PSEN1-209ENST00000553855 PI4K2BG5E9Z4 385 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 P4HA2O15460 535 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MICAL2O94851 1124 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 VNN1O95497 513 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 ASS1P00966 412 aaKnown RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 LAMP2P13473 410 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 PTPN1P18031 435 aaKnown RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MAGEA11P43364 429 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MTIF2P46199 727 aaKnown RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 PMS1P54277 932 aaKnown RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 PSMC1P62191 440 aaKnown RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 PPP3CAQ08209 521 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 TDGQ13569 410 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 CFAP221Q4G0U5 840 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MDH1BQ5I0G3 518 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 TMEM31Q5JXX7 168 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 TTI2Q6NXR4 508 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 VSTM1Q6UX27 236 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 DNAJB7Q7Z6W7 309 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 UNC93AQ86WB7 457 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 OSTM1Q86WC4 334 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 ZC3H3Q8IXZ2 948 aaKnown RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MYCBPAPQ8TBZ2 947 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 TAS1R2Q8TE23 839 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 KBTBD7Q8WVZ9 684 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 FGF13Q92913 245 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 PSMG2Q969U7 264 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MYLPFQ96A32 169 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MCRS1Q96EZ8 462 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MYADMQ96S97 322 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 RTP3Q9BQQ7 232 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 ELOVL4Q9GZR5 314 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 XYLT2Q9H1B5 865 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 TSPAN10Q9H1Z9 355 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 ATXN3LQ9H3M9 355 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 SMYD3Q9H7B4 428 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 CD320Q9NPF0 282 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 CEP72Q9P209 647 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 ZMYM5Q9UJ78 669 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 FBXL21Q9UKT6 434 aa8.87□□□□□ -0.99
PSEN1-209ENST00000553855 MAGED2Q9UNF1 606 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-209ENST00000553855 TCF20Q9UGU0 1960 aaKnown RBP8.86□□□□□ -0.99
PSEN1-209ENST00000553855 MYBPHLA2RUH7 354 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 GFRA3O60609 400 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 SOAT2O75908 522 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 AFPP02771 609 aaKnown RBP8.86□□□□□ -0.99
PSEN1-209ENST00000553855 CD58P19256 250 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 BMP6P22004 513 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 BDNFP23560 247 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 TBXAS1P24557 533 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-209ENST00000553855 CYP2F1P24903 491 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 LMO2P25791 158 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 GABRR2P28476 465 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 ERCC5P28715 1186 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-209ENST00000553855 RAP1GAPP47736 663 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 CDH8P55286 799 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 SLC8A3P57103 927 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 ZXDAP98168 799 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 CCDC183Q5T5S1 534 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 SPOPLQ6IQ16 392 aa8.86□□□□□ -0.99
PSEN1-209ENST00000553855 FAM171BQ6P995 826 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms