RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 MSRB2Q9Y3D2 182 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 ABCA7Q8IZY2 2146 aa12.67□□□□□ -0.38
SRP54-203ENST00000553544 PATE3B3GLJ2 98 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 KIAA0391O15091 583 aaKnown RBP12.66□□□□□ -0.38
SRP54-203ENST00000553544 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
SRP54-203ENST00000553544 MAP3K13O43283 966 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
SRP54-203ENST00000553544 CASP1P29466 404 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 IFNAR2P48551 515 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 ASIC1P78348 528 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 FAM160A1Q05DH4 1040 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
SRP54-203ENST00000553544 C2orf27AQ580R0 203 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 FAM26FQ5R3K3 315 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 WSCD1Q658N2 575 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 UNC13DQ70J99 1090 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 TTC16Q8NEE8 873 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 CXorf38Q8TB03 319 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
SRP54-203ENST00000553544 CYP2S1Q96SQ9 504 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 NUSAP1Q9BXS6 441 aaKnown RBP12.66□□□□□ -0.38
SRP54-203ENST00000553544 TPSD1Q9BZJ3 242 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 EVLQ9UI08 416 aaPredicted RBP12.66□□□□□ -0.38
SRP54-203ENST00000553544 NBEAQ8NFP9 2946 aa12.66□□□□□ -0.38
SRP54-203ENST00000553544 TRAV19A0A0A6YYK7 116 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 PVALEFA0A1B0GWK0 134 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 GOLGA8IPA6NC78 632 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 GOLGA8JA6NMD2 632 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 TGFB1I1O43294 461 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 ALDH1A2O94788 518 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 USP17L7P0C7H9 530 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 SLFN14P0C7P3 912 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 CMA1P23946 247 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 TAF6P49848 677 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 RPL10AP62906 217 aaKnown RBP12.65□□□□□ -0.38
SRP54-203ENST00000553544 TSPY1Q01534 308 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 CUL4BQ13620 913 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 EML3Q32P44 896 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 TRIM61Q5EBN2 209 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 ANO7Q6IWH7 933 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 LPCAT2Q7L5N7 544 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 RASSF3Q86WH2 238 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 GPD1LQ8N335 351 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 RIN3Q8TB24 985 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 USP33Q8TEY7 942 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 SCFD1Q8WVM8 642 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.38
SRP54-203ENST00000553544 PI4K2AQ9BTU6 479 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 BLZF1Q9H2G9 400 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 PCIF1Q9H4Z3 704 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 TRPC7Q9HCX4 862 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 RBAKQ9NYW8 714 aaPredicted RBP12.65□□□□□ -0.38
SRP54-203ENST00000553544 SERTAD1Q9UHV2 236 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 WNT6Q9Y6F9 365 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 OBSL1O75147 1896 aa12.65□□□□□ -0.38
SRP54-203ENST00000553544 PCNX2A6NKB5 2137 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 NUP210Q8TEM1 1887 aaPredicted RBP12.64□□□□□ -0.39
SRP54-203ENST00000553544 FAM237AA0A1B0GTK4 181 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 KPNA7A9QM74 516 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 H0Y626 953 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 K7EQS6 105 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 TNFRSF10BO14763 440 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
SRP54-203ENST00000553544 HYAL3O43820 417 aaPredicted RBP12.64□□□□□ -0.39
SRP54-203ENST00000553544 KLRC4O43908 158 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 TRIM16O95361 564 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 CKMP06732 381 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 BCKDHBP21953 392 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 DPP6P42658 865 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 SEC13P55735 322 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 KRT85P78386 507 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 CRY1Q16526 586 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 DDR2Q16832 855 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 BMT2Q1RMZ1 405 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 KIAA1211LQ6NV74 962 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 SYT12Q8IV01 421 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 C1orf127Q8N9H9 656 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 FSIP1Q8NA03 581 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 SPATA32Q96LK8 384 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 MYRFLQ96LU7 910 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 LINC00597Q9H2U6 94 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 PDE11AQ9HCR9 933 aa12.64□□□□□ -0.39
SRP54-203ENST00000553544 UBE4BO95155 1302 aa12.63□□□□□ -0.39
SRP54-203ENST00000553544 A0A1B0GVL5 298 aa12.63□□□□□ -0.39
SRP54-203ENST00000553544 PFKFB1P16118 471 aa12.63□□□□□ -0.39
SRP54-203ENST00000553544 HDCP19113 662 aa12.63□□□□□ -0.39
SRP54-203ENST00000553544 PNPLA4P41247 253 aa12.63□□□□□ -0.39
SRP54-203ENST00000553544 AFMP43652 599 aa12.63□□□□□ -0.39
SRP54-203ENST00000553544 MAPK8P45983 427 aa12.63□□□□□ -0.39
SRP54-203ENST00000553544 GPR15P49685 360 aa12.63□□□□□ -0.39
SRP54-203ENST00000553544 SNRPFP62306 86 aaKnown RBP12.63□□□□□ -0.39
SRP54-203ENST00000553544 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
SRP54-203ENST00000553544 MRPS21P82921 87 aaKnown RBP12.63□□□□□ -0.39
SRP54-203ENST00000553544 TFAMQ00059 246 aaKnown RBP12.63□□□□□ -0.39
SRP54-203ENST00000553544 BYSLQ13895 437 aaKnown RBP12.63□□□□□ -0.39
SRP54-203ENST00000553544 ZNF77Q15935 545 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms