RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GPR25O00155 361 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 GH1P01241 217 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ITGB3P05106 788 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 DESP17661 470 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 GPD2P43304 727 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CLCN3P51790 818 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ZNF143P52747 638 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CCNA1P78396 465 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 OTUD4Q01804 1114 aaKnown RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CCDC15Q0P6D6 951 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 TFDP2Q14188 446 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 SPARCL1Q14515 664 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 MTFR1Q15390 333 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 AMHR2Q16671 573 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 FAM110CQ1W6H9 321 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 EFHC2Q5JST6 749 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 TMEM63BQ5T3F8 832 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 SCARA3Q6AZY7 606 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 TXNRD3NBQ6F5E7 133 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 JADE1Q6IE81 842 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CYP4X1Q8N118 509 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CEP120Q8N960 986 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 GLIS1Q8NBF1 620 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 PPTC7Q8NI37 304 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 USP6NLQ92738 828 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 TGS1Q96RS0 853 aaKnown RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 SMC6Q96SB8 1091 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ADPGKQ9BRR6 497 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CNPY3Q9BT09 278 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CYTH4Q9UIA0 394 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 POLIQ9UNA4 740 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 DERAQ9Y315 318 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 A0A1B0GUA9 196 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 RBM47A0AV96 593 aaKnown RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 GOLGA8SH3BPF8 625 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 MCF2LO15068 1137 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CHUKO15111 745 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 SPAG6O75602 509 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 MICAL2O94851 1124 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ENDOD1O94919 500 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 NFICP08651 508 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 INSRRP14616 1297 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 SKIV2L2P42285 1042 aaKnown RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CTCFP49711 727 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 GEMIN4P57678 1058 aaKnown RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 OSTNP61366 133 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 RBP5P82980 135 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ARHGAP1Q07960 439 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 TMEM132DQ14C87 1099 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 LRRC14Q15048 493 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 TMED2Q15363 201 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 RNF43Q68DV7 783 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 CYB5D1Q6P9G0 228 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 LCLAT1Q6UWP7 414 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 MAP7D3Q8IWC1 876 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ZBED8Q8IZ13 594 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ARFGAP1Q8N6T3 406 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 DNAJC5GQ8N7S2 189 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ANKRD42Q8N9B4 389 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 NAT8LQ8N9F0 302 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 KCTD6Q8NC69 237 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 JOSD2Q8TAC2 188 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ALKBH8Q96BT7 664 aaKnown RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 HPDLQ96IR7 371 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 PWWP2AQ96N64 755 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 MINDY3Q9H8M7 445 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 METTL5Q9NRN9 209 aaKnown RBP13.53□□□□□ -0.24
SHMT2-205ENST00000553474 KLHL14Q9P2G3 628 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 TBK1Q9UHD2 729 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 USP18Q9UMW8 372 aa13.53□□□□□ -0.24
SHMT2-205ENST00000553474 ZNF487B1APH4 448 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 M0QYV0 167 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 ASMTLO95671 621 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 TRUB2O95900 331 aaKnown RBP13.52□□□□□ -0.25
SHMT2-205ENST00000553474 IFNB1P01574 187 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 ERBB2P04626 1255 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 LGALS2P05162 132 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 SETSIPP0DME0 302 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 CREB1P16220 341 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 IL1R2P27930 398 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 GCAP28676 217 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 PPARDQ03181 441 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 PDIA2Q13087 525 aaKnown RBP13.52□□□□□ -0.25
SHMT2-205ENST00000553474 MPP2Q14168 576 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 PDK2Q15119 407 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.25
SHMT2-205ENST00000553474 C4orf22Q6V702 233 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 ARMCX2Q7L311 632 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 ZNF410Q86VK4 478 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 PDIK1LQ8N165 341 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 MGARPQ8TDB4 240 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 TRAPPC12Q8WVT3 735 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 TBCBQ99426 244 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 SDCBP2Q9H190 292 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 RNPEPQ9H4A4 650 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms