RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 hCG_2014768A0A024R1R8 64 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 LRRC14BA6NHZ5 514 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 F2RL2O00254 374 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 IL33O95760 270 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 NUDT3O95989 172 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 EN2P19622 333 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-218ENST00000553309 PLA2G5P39877 138 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 ZNF844Q08AG5 666 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 MPP3Q13368 585 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 PKN2Q16513 984 aaKnown RBP6.11□□□□□ -1.43
ATXN3-218ENST00000553309 FBXO46Q6PJ61 603 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-218ENST00000553309 ZNF365Q70YC5 407 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 DNAJC10Q8IXB1 793 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 NSUN7Q8NE18 718 aaKnown RBP6.11□□□□□ -1.43
ATXN3-218ENST00000553309 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 KLHL32Q96NJ5 620 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 RIOX1Q9H6W3 641 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 SYNPO2LQ9H987 977 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 AASDHPPTQ9NRN7 309 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 VSX1Q9NZR4 365 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-218ENST00000553309 CDYLQ9Y232 598 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 POLHQ9Y253 713 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 PCDHA3Q9Y5H8 950 aa6.11□□□□□ -1.43
ATXN3-218ENST00000553309 SALL3Q9BXA9 1300 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 KIAA0355O15063 1070 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 POU2F2P09086 479 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 CYP2C19P33261 490 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 ADRA1BP35368 520 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
ATXN3-218ENST00000553309 IGBP1P78318 339 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 FPGSQ05932 587 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 CCDC93Q567U6 631 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 HSP90AB2PQ58FF8 381 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 TMEM240Q5SV17 173 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 THEMIS2Q5TEJ8 643 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 SP5Q6BEB4 398 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-218ENST00000553309 RGMBQ6NW40 437 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 SLC4A10Q6U841 1118 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 Q6ZNX1 250 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 USP45Q70EL2 814 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 AIFM2Q9BRQ8 373 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 SIDT1Q9NXL6 827 aaKnown RBP6.1□□□□□ -1.43
ATXN3-218ENST00000553309 BCCIPQ9P287 314 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATXN3-218ENST00000553309 DMTF1Q9Y222 760 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 PAPPA2Q9BXP8 1791 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 COL4A5P29400 1685 aa6.1□□□□□ -1.43
ATXN3-218ENST00000553309 KIAA0100Q14667 2235 aaKnown RBP6.1□□□□□ -1.43
ATXN3-218ENST00000553309 EDC4Q6P2E9 1401 aaKnown RBP6.09□□□□□ -1.43
ATXN3-218ENST00000553309 RTL1A6NKG5 1358 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 SOS1Q07889 1333 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-218ENST00000553309 TJP1Q07157 1748 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 NT5C1B-RDH14C9J2C7 533 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 PHKG2P15735 406 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 CXCR5P32302 372 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 NEK2P51955 445 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 ERCC6LQ2NKX8 1250 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 PRR5LQ6MZQ0 368 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 USP50Q70EL3 339 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-218ENST00000553309 CLNKQ7Z7G1 428 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 CFAP52Q8N1V2 620 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 PDPRQ8NCN5 879 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 TMIEQ8NEW7 156 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 SLC12A5Q9H2X9 1139 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 BRD9Q9H8M2 597 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 GNL3LQ9NVN8 582 aaKnown RBP6.09□□□□□ -1.43
ATXN3-218ENST00000553309 IP6K2Q9UHH9 426 aa6.09□□□□□ -1.43
ATXN3-218ENST00000553309 BCORQ6W2J9 1755 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 A0A1W2PP64 1363 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 COL15A1P39059 1388 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 ZNF831Q5JPB2 1677 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 AKAP11Q9UKA4 1901 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 A0A1W2PS29 197 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 ZAR1LA6NP61 321 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 PRAMEF10O60809 474 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 DTNBO60941 627 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 PPFIA2O75334 1257 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 ARIH2O95376 493 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 ANXA1P04083 346 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 GJB1P08034 283 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 KCNA2P16389 499 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 GATA3P23771 443 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 RPS7P62081 194 aaKnown RBP6.08□□□□□ -1.44
ATXN3-218ENST00000553309 DYRK1AQ13627 763 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-218ENST00000553309 LNX2Q8N448 690 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 SLC9A6Q92581 669 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 HOOK2Q96ED9 719 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 LRIG1Q96JA1 1093 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 COG3Q96JB2 828 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 CRAMP1Q96RY5 1269 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 BRIP1Q9BX63 1249 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 SLAMF7Q9NQ25 335 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 CTTNBP2NLQ9P2B4 639 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 NARFQ9UHQ1 456 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 ANKRD6Q9Y2G4 727 aa6.08□□□□□ -1.44
ATXN3-218ENST00000553309 NEU2Q9Y3R4 380 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms