RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 FAM83CQ9BQN1 747 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 B3GNT5Q9BYG0 378 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 LMAN1LQ9HAT1 526 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 TRPM5Q9NZQ8 1165 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 FANCMQ8IYD8 2048 aa13.79□□□□□ -0.2
ACTN1-207ENST00000553290 CETN3O15182 167 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 CKMP06732 381 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 CHRNB1P11230 501 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 HDCP19113 662 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 TRIM21P19474 475 aaKnown RBP13.78□□□□□ -0.2
ACTN1-207ENST00000553290 RAP1GAPP47736 663 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 SOX9P48436 509 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 MCCD1P59942 119 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-207ENST00000553290 USP46P62068 366 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 CSTF1Q05048 431 aaKnown RBP13.78□□□□□ -0.2
ACTN1-207ENST00000553290 TNK2Q07912 1038 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 MTAPQ13126 283 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 RUNX3Q13761 415 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 PPP2R5DQ14738 602 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-207ENST00000553290 UNC93AQ86WB7 457 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 SMYD4Q8IYR2 804 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-207ENST00000553290 SMARCE1Q969G3 411 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 SLITRK1Q96PX8 696 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 CYP2S1Q96SQ9 504 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 ZNF518BQ9C0D4 1074 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 SDCBP2Q9H190 292 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 GCNT4Q9P109 453 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 R4GN57 208 aa13.78□□□□□ -0.2
ACTN1-207ENST00000553290 C2orf78A6NCI8 922 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 CLDN5O00501 218 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 RTN3O95197 1032 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-207ENST00000553290 LMNAP02545 664 aaKnown RBP13.77□□□□□ -0.21
ACTN1-207ENST00000553290 TRIM49P0CI25 452 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 TRIM49CP0CI26 452 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 EPB41P11171 864 aaKnown RBP13.77□□□□□ -0.21
ACTN1-207ENST00000553290 TCF3P15923 654 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 GTF2H1P32780 548 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 PRCPP42785 496 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 GCLMP48507 274 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 AMPD2Q01433 879 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 MTF1Q14872 753 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 PDGFRLQ15198 375 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 ELOA2Q8IYF1 753 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-207ENST00000553290 NUP93Q8N1F7 819 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 CRYBG2Q8N1P7 616 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 ARL14EPQ8N8R7 260 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-207ENST00000553290 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 SPATA20Q8TB22 786 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 ELMO3Q96BJ8 720 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 SMARCD1Q96GM5 515 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 SLC22A12Q96S37 553 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 TSG101Q99816 390 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 MED10Q9BTT4 135 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 FAM126AQ9BYI3 521 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-207ENST00000553290 TMEM8AQ9HCN3 771 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 PRMT8Q9NR22 394 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-207ENST00000553290 PCDHA5Q9Y5H7 936 aa13.77□□□□□ -0.21
ACTN1-207ENST00000553290 ZNF840PA6NDX5 716 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 STX10O60499 249 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 KINO60870 393 aaKnown RBP13.76□□□□□ -0.21
ACTN1-207ENST00000553290 ASPAP45381 313 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 CCR3P51677 355 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 NDST1P52848 882 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 CACNA2D1P54289 1103 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 PPP3CAQ08209 521 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 USP4Q13107 963 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 PON2Q15165 354 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 ZNF77Q15935 545 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 KRT39Q6A163 491 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 SPOPLQ6IQ16 392 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 TXNDC11Q6PKC3 985 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 PAQR9Q6ZVX9 377 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 ACOT1Q86TX2 421 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 FAM35AQ86V20 835 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 SYNPOQ8N3V7 929 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 PDZD8Q8NEN9 1154 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 TAS1R2Q8TE23 839 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 OSCP1Q8WVF1 389 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 ATRIPQ8WXE1 791 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 OVCA2Q8WZ82 227 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 DNAI2Q9GZS0 605 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 EBF3Q9H4W6 596 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 CYP3A43Q9HB55 503 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 DMAP1Q9NPF5 467 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-207ENST00000553290 HPS4Q9NQG7 708 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 TMEM30AQ9NV96 361 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 ZSCAN32Q9NX65 697 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 ARHGAP26Q9UNA1 814 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 PCDHGA2Q9Y5H1 932 aa13.76□□□□□ -0.21
ACTN1-207ENST00000553290 RIF1Q5UIP0 2472 aaKnown RBP13.75□□□□□ -0.21
ACTN1-207ENST00000553290 CFAP54Q96N23 3096 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 HELZP42694 1942 aaKnown RBP13.75□□□□□ -0.21
ACTN1-207ENST00000553290 YWHAQP27348 245 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 IFNAR2P48551 515 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 NRLP54845 237 aa13.75□□□□□ -0.21
ACTN1-207ENST00000553290 FKBP3Q00688 224 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms