RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 MAGED2Q9UNF1 606 aaPredicted RBP20.5■□□□□ 0.87
PTCH1-227ENST00000553256 CTNND2Q9UQB3 1225 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 MTF2Q9Y483 593 aaPredicted RBP20.5■□□□□ 0.87
PTCH1-227ENST00000553256 PIEZO1Q92508 2521 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 CHADO15335 359 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 GALR2O43603 387 aaPredicted RBP20.49■□□□□ 0.87
PTCH1-227ENST00000553256 STX10O60499 249 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 OLFM2O95897 454 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 GDI1P31150 447 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 MLLT6P55198 1093 aaPredicted RBP20.49■□□□□ 0.87
PTCH1-227ENST00000553256 ZXDBP98169 803 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 PAK1Q13153 545 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 TRIM59Q8IWR1 403 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 CCDC105Q8IYK2 499 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 MAB21L3Q8N8X9 362 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 IRF7Q92985 503 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 HNRNPABQ99729 332 aaKnown RBP20.49■□□□□ 0.87
PTCH1-227ENST00000553256 FOXQ1Q9C009 403 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 MFSD1Q9H3U5 465 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 FAM124BQ9H5Z6 455 aaPredicted RBP20.49■□□□□ 0.87
PTCH1-227ENST00000553256 METTL14Q9HCE5 456 aaKnown RBP20.49■□□□□ 0.87
PTCH1-227ENST00000553256 HEBP1Q9NRV9 189 aa20.49■□□□□ 0.87
PTCH1-227ENST00000553256 KANSL1LA0AUZ9 987 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 ZNF840PA6NDX5 716 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 HHLA1C9JL84 531 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 CCDC130P13994 396 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 TCF3P15923 654 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 PLA2G5P39877 138 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 FMO5P49326 533 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 STX17P56962 302 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 TAF12Q16514 161 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 IRF2BP1Q8IU81 584 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 PJA1Q8NG27 643 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 SLC2A14Q8TDB8 520 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 CHFRQ96EP1 664 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 PRRX2Q99811 253 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 FAM83CQ9BQN1 747 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 OSBPL6Q9BZF3 934 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 VPS13AQ96RL7 3174 aa20.48■□□□□ 0.87
PTCH1-227ENST00000553256 BICDL2A1A5D9 508 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 C2orf78A6NCI8 922 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 ZDHHC11BP0C7U3 371 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 NHLH1Q02575 133 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 DCAF17Q5H9S7 520 aaPredicted RBP20.47■□□□□ 0.87
PTCH1-227ENST00000553256 WDR44Q5JSH3 913 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 SNX30Q5VWJ9 437 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 CELF5Q8N6W0 485 aaKnown RBP20.47■□□□□ 0.87
PTCH1-227ENST00000553256 SLC4A11Q8NBS3 891 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 BPIFB1Q8TDL5 484 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 MRPS31Q92665 395 aaKnown RBP20.47■□□□□ 0.87
PTCH1-227ENST00000553256 CLDN23Q96B33 292 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 SMARCD1Q96GM5 515 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 GCNAQ96QF7 691 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 CYP2S1Q96SQ9 504 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 NT5C1AQ9BXI3 368 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 IMPG2Q9BZV3 1241 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 BRD9Q9H8M2 597 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 LTB4R2Q9NPC1 389 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 RWDD2AQ9UIY3 292 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 USP34Q70CQ2 3546 aa20.47■□□□□ 0.87
PTCH1-227ENST00000553256 ZNF638Q14966 1978 aaKnown RBP20.46■□□□□ 0.87
PTCH1-227ENST00000553256 ZNF263O14978 683 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 OAS1P00973 400 aaKnown RBP20.46■□□□□ 0.87
PTCH1-227ENST00000553256 PFKLP17858 780 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 CD72P21854 359 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 TARSP26639 723 aaKnown RBP20.46■□□□□ 0.87
PTCH1-227ENST00000553256 PGFP49763 221 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 RAD23BP54727 409 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 ZNF77Q15935 545 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 CLEC20AQ6ZU45 233 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 NUP93Q8N1F7 819 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 SCAMP5Q8TAC9 235 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 SHDQ96IW2 340 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 ZFYVE19Q96K21 471 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 KRT82Q9NSB4 513 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 CISHQ9NSE2 258 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 TDP1Q9NUW8 608 aa20.46■□□□□ 0.87
PTCH1-227ENST00000553256 OTOL1A6NHN0 477 aaPredicted RBP20.45■□□□□ 0.86
PTCH1-227ENST00000553256 ANXA13P27216 316 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 TAF10Q12962 218 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 USP4Q13107 963 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 ARHGAP29Q52LW3 1261 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 TCERG1LQ5VWI1 586 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 TPRG1Q6ZUI0 275 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 DTWD2Q8NBA8 298 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 GPT2Q8TD30 523 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 IPO9Q96P70 1041 aaKnown RBP20.45■□□□□ 0.86
PTCH1-227ENST00000553256 SRRTQ9BXP5 876 aaKnown RBP20.45■□□□□ 0.86
PTCH1-227ENST00000553256 RNF38Q9H0F5 515 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 KIF9Q9HAQ2 790 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 DMAP1Q9NPF5 467 aaPredicted RBP20.45■□□□□ 0.86
PTCH1-227ENST00000553256 HPS4Q9NQG7 708 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 FAM49BQ9NUQ9 324 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 SIT1Q9Y3P8 196 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 TICRRQ7Z2Z1 1910 aa20.45■□□□□ 0.86
PTCH1-227ENST00000553256 PATJQ8NI35 1801 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 P4HA2O15460 535 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 AP1G2O75843 785 aa20.44■□□□□ 0.86
PTCH1-227ENST00000553256 DCNP07585 359 aaKnown RBP20.44■□□□□ 0.86
PTCH1-227ENST00000553256 CD58P19256 250 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms