RNA–Protein interactions for RNA: ENST00000552240.6

PRICKLE1-209, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-209ENST00000552240 TRMT10CQ7L0Y3 403 aaKnown RBP12.82□□□□□ -0.36
PRICKLE1-209ENST00000552240 MECRQ9BV79 373 aa12.82□□□□□ -0.36
PRICKLE1-209ENST00000552240 TRIM6Q9C030 488 aaPredicted RBP12.82□□□□□ -0.36
PRICKLE1-209ENST00000552240 NXF3Q9H4D5 531 aaKnown RBP12.82□□□□□ -0.36
PRICKLE1-209ENST00000552240 ECT2Q9H8V3 914 aa12.82□□□□□ -0.36
PRICKLE1-209ENST00000552240 STYXL1Q9Y6J8 313 aa12.82□□□□□ -0.36
PRICKLE1-209ENST00000552240 IGF2BP3O00425 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CLDN5O00501 218 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 ADCY6O43306 1168 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 PSTPIP1O43586 416 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 SNX3O60493 162 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 GPX6P59796 221 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 SNRPFP62306 86 aaKnown RBP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CASC4Q6P4E1 433 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 FAM183BPQ6ZVS7 135 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 RCOR2Q8IZ40 523 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 PPM1NQ8N819 430 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 MEIS3P2A8K0S8 358 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 H3BRB1 525 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 ABLIM1O14639 778 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 DNALI1O14645 258 aaPredicted RBP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 ZC3H11AO75152 810 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CALB1P05937 261 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 MYBL1P10243 752 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 KDELR1P24390 212 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 GCAP28676 217 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 ELK3P41970 407 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CPA2P48052 419 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 VCPP55072 806 aaKnown RBP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 GOLGA7BQ2TAP0 167 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 ACCSLQ4AC99 568 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CGB2Q6NT52 195 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 LVRNQ6Q4G3 990 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CCDC91Q7Z6B0 441 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 PRPF39Q86UA1 669 aaKnown RBP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 FAM131BQ86XD5 332 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 XYLT1Q86Y38 959 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CPT1BQ92523 772 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 ERP27Q96DN0 273 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 TRIM11Q96F44 468 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 DHX35Q9H5Z1 703 aaKnown RBP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 TUT1Q9H6E5 874 aaKnown RBP12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 HAO1Q9UJM8 370 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
PRICKLE1-209ENST00000552240 CDH16O75309 829 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 RFC5P40937 340 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 AFF1P51825 1210 aaKnown RBP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 SESN3P58005 492 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 MXD4Q14582 209 aaPredicted RBP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 HHATQ5VTY9 493 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 MORC4Q8TE76 937 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 KLHL29Q96CT2 875 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 RBM41Q96IZ5 413 aaKnown RBP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 FAM81BQ96LP2 452 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 MYCBPQ99417 103 aaPredicted RBP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 CCDC77Q9BR77 488 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 WDR83Q9BRX9 315 aaKnown RBP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 RBL1P28749 1068 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 EFNA5P52803 228 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 RTP1P59025 263 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 CLDN10P78369 228 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 TTLL4Q14679 1199 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 TMEM132DQ14C87 1099 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 CATSPER4Q7RTX7 472 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 SPATA21Q7Z572 469 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 FAM228AQ86W67 206 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 VSIG1Q86XK7 387 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 ZNF677Q86XU0 584 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 ALLCQ8N6M5 410 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 EIF1ADQ8N9N8 165 aaKnown RBP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 GIMAP7Q8NHV1 300 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 FAF2Q96CS3 445 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 PRR11Q96HE9 360 aaPredicted RBP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 TMEM176AQ96HP8 235 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 DPP3Q9NY33 737 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 GJD2Q9UKL4 321 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 IGKV6D-21A0A0A0MT36 114 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 USP12O75317 370 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 CTSHP09668 335 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 MCL1Q07820 350 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 ZPBP2Q6X784 338 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 LRRC6Q86X45 466 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 C12orf50Q8NA57 414 aaPredicted RBP12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 C3orf20Q8ND61 904 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 AGAP3Q96P47 875 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 PDZD7Q9H5P4 517 aa12.8□□□□□ -0.36
PRICKLE1-209ENST00000552240 CLUHO75153 1309 aa12.79□□□□□ -0.36
PRICKLE1-209ENST00000552240 CYB561D2O14569 222 aa12.79□□□□□ -0.36
PRICKLE1-209ENST00000552240 YBX3P16989 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRICKLE1-209ENST00000552240 SPARCL1Q14515 664 aa12.79□□□□□ -0.36
PRICKLE1-209ENST00000552240 KBTBD12Q3ZCT8 623 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms