RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 CALB1P05937 261 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 ASPAP45381 313 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 CFAP221Q4G0U5 840 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 CASC4Q6P4E1 433 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 DCLRE1AQ6PJP8 1040 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 TFAP2DQ7Z6R9 452 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 SYCE1Q8N0S2 351 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 DEFB106AQ8N104 65 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 BORCS6Q96GS4 357 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 FBXL18Q96ME1 805 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 ATXN3LQ9H3M9 355 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 AAASQ9NRG9 546 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 MRPL17Q9NRX2 175 aaKnown RBP8.59□□□□□ -1.03
CHPT1-208ENST00000552215 OGDHLQ9ULD0 1010 aa8.59□□□□□ -1.03
CHPT1-208ENST00000552215 SF3B1O75533 1304 aaKnown RBP eCLIP8.59□□□□□ -1.033e-6■■■■■ 52.5
CHPT1-208ENST00000552215 TET1Q8NFU7 2136 aa8.59□□□□□ -1.04
CHPT1-208ENST00000552215 GTPBP10A4D1E9 387 aaKnown RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 E7EVH7 732 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 HOXA2O43364 376 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 DEUP1Q05D60 604 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 PTPN20Q4JDL3 420 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 FAM109BQ6ICB4 259 aaPredicted RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 TAX1BP1Q86VP1 789 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 LRRC43Q8N309 656 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 OTUD6BQ8N6M0 293 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 LRRN4CLQ8ND94 238 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 PDCD6IPQ8WUM4 868 aaKnown RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 KRT35Q92764 455 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 STRA6Q9BX79 667 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 AIPL1Q9NZN9 384 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 SNX10Q9Y5X0 201 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 A0A1W2PQJ5 194 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 SSU72P8A0A1W2PR75 194 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 LHX1P48742 406 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 GUCY2DQ02846 1103 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 PPIGQ13427 754 aaKnown RBP eCLIP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 CLEC16AQ2KHT3 1053 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 C9orf50Q5SZB4 431 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 C10orf76Q5T2E6 689 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 HGSNATQ68CP4 663 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 PRUNE1Q86TP1 453 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 MCOLN2Q8IZK6 566 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 FAM172AQ8WUF8 416 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 RSPH1Q8WYR4 309 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 MAF1Q9H063 256 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 UPF3AQ9H1J1 476 aaKnown RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 SLC12A8A0AV02 714 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 C9IYK1 514 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 BEST1O76090 585 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 ATICP31939 592 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 PDCLQ13371 301 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 UAP1Q16222 522 aaPredicted RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 C4orf50Q6ZRC1 276 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 FAM183BPQ6ZVS7 135 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 CCDC117Q8IWD4 279 aaPredicted RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 KLHL23Q8NBE8 558 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 CELF6Q96J87 481 aaKnown RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 PIWIL1Q96J94 861 aaKnown RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 UBN1Q9NPG3 1134 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 SPG21Q9NZD8 308 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 DFFAO00273 331 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 RFX1P22670 979 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 ADCY8P40145 1251 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 FAXCQ5TGI0 409 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 PPP2R2DQ66LE6 453 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 TPGS1Q6ZTW0 290 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 FEZF2Q8TBJ5 459 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 RSAD2Q8WXG1 361 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 AGAP3Q96P47 875 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 C17orf80Q9BSJ5 609 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 ARGLU1Q9NWB6 273 aaPredicted RBP8.58□□□□□ -1.04
CHPT1-208ENST00000552215 NAALADL1Q9UQQ1 740 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 PCDHB5Q9Y5E4 795 aa8.58□□□□□ -1.04
CHPT1-208ENST00000552215 FOCADQ5VW36 1801 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 ARHGEF37A1IGU5 675 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 LCHNA4D1U4 455 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 CILPO75339 1184 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 TIMP1P01033 207 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 ERBB2P04626 1255 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 GALTP07902 379 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 ETFBP38117 255 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 USP41Q3LFD5 358 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 COBLL1Q53SF7 1204 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 RTP2Q5QGT7 225 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 MAATS1Q7Z4T9 603 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 CCDC89Q8N998 374 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 FAM81BQ96LP2 452 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 OSBPL9Q96SU4 736 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 EDEM3Q9BZQ6 932 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 XYLT2Q9H1B5 865 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 PIH1D1Q9NWS0 290 aaKnown RBP8.57□□□□□ -1.04
CHPT1-208ENST00000552215 STXBP5LQ9Y2K9 1186 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 JRKLQ9Y4A0 524 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 O00370 1275 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 ATP8B3O60423 1300 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 B4GALT3O60512 393 aa8.57□□□□□ -1.04
CHPT1-208ENST00000552215 PIGRP01833 764 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms