RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TMEM110Q86TL2 294 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 RELL1Q8IUW5 271 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 EPS8L3Q8TE67 593 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 SLC35F5Q8WV83 523 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 EPN3Q9H201 632 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 FAM49BQ9NUQ9 324 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 GDAP2Q9NXN4 497 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 HESX1Q9UBX0 185 aa14.71□□□□□ -0.05
RAB3IP-216ENST00000552199 SMIM23A6NLE4 172 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 A8MXQ7 604 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 DUSP11O75319 330 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 ACSL3O95573 720 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 AGTP01019 485 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 CD48P09326 243 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 DYNLT1P63172 113 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 OTUD4Q01804 1114 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 PLCB3Q01970 1234 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 TAF5Q15542 800 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 SH3PXD2AQ5TCZ1 1133 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 CEP128Q6ZU80 1094 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 CRYBG2Q8N1P7 616 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 ZCCHC9Q8N567 271 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 SMG8Q8ND04 991 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 TRPV1Q8NER1 839 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 STK32AQ8WU08 396 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 HSPH1Q92598 858 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 PIWIL1Q96J94 861 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 ZNF560Q96MR9 790 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 PWWP2AQ96N64 755 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 PEBP4Q96S96 227 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 RABEP2Q9H5N1 569 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 CNOT10Q9H9A5 744 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 DNAJC17Q9NVM6 304 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 NINJ2Q9NZG7 142 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 IPPQ9Y573 584 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 KPNA7A9QM74 516 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 DPYSL4O14531 572 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 SPTLC1O15269 473 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 KPNA6O60684 536 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 ETS1P14921 441 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 CTGFP29279 349 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 PNPLA4P41247 253 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 SNX16P57768 344 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 SLC6A3Q01959 620 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 GPS1Q13098 491 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 CRHR2Q13324 411 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 AUHQ13825 339 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 KYNUQ16719 465 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 TNFAIP8L3Q5GJ75 292 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 MFSD5Q6N075 450 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 OLFML1Q6UWY5 402 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 ACTL9Q8TC94 416 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 KBTBD7Q8WVZ9 684 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 LPIN3Q9BQK8 851 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 TMEM121Q9BTD3 319 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 STMN4Q9H169 189 aaPredicted RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 DPEP3Q9H4B8 488 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 PCDH9Q9HC56 1237 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 RSPH14Q9UHP6 348 aa14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 TPX2Q9ULW0 747 aaKnown RBP14.7□□□□□ -0.06
RAB3IP-216ENST00000552199 MYADML2A6NDP7 307 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 SGK1O00141 431 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 GRAP2O75791 330 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 GABBR2O75899 941 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 ENDOD1O94919 500 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 FGFR1P11362 822 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 GNL1P36915 607 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 TAF6P49848 677 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 IFI35P80217 286 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 SOX4Q06945 474 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 PDE4CQ08493 712 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 C15orf59Q2T9L4 293 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 CCDC14Q49A88 953 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 TAF2Q6P1X5 1199 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 CYP4V2Q6ZWL3 525 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 LIMS2Q7Z4I7 341 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 SESTD1Q86VW0 696 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 FAM228AQ86W67 206 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 RFX6Q8HWS3 928 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 ARRDC4Q8NCT1 418 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 KHSRPQ92945 711 aaKnown RBP eCLIP14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 RSAD1Q9HA92 442 aa14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 SAE1Q9UBE0 346 aaPredicted RBP14.69□□□□□ -0.06
RAB3IP-216ENST00000552199 HCRTO43612 131 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 PDGFRBP09619 1106 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 C6orf222P0C671 652 aaPredicted RBP14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 PSMC4P43686 418 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 SLCO1A2P46721 670 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 CCT5P48643 541 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 CDR1P51861 262 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 SV2CQ496J9 727 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 RAB6CQ53S08 254 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 SCUBE3Q8IX30 993 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 ANKRD52Q8NB46 1076 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 SERPINB12Q96P63 405 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 RAB6CQ9H0N0 254 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 SNX25Q9H3E2 840 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 GOLGA2P5Q9HBQ8 144 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 FAM155AB1AL88 458 aaPredicted RBP14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 APOC4-APOC2K7ER74 178 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms