RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 CASP1P29466 404 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 MPLP40238 635 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 NASPP49321 788 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 LIMK1P53667 647 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 SEC13P55735 322 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 KCNB1Q14721 858 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 FBXO43Q4G163 708 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 MDH1BQ5I0G3 518 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 IL31Q6EBC2 164 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 C4orf50Q6ZRC1 276 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 EPM2AIP1Q7L775 607 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 LINC00301Q8NCQ3 95 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 ZNF516Q92618 1163 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 SPATA17Q96L03 361 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 TRIM9Q9C026 710 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 GZF1Q9H116 711 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 DPEP3Q9H4B8 488 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 KBTBD4Q9NVX7 518 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 MORC2Q9Y6X9 1032 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 LAMA1P25391 3075 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 NUP205Q92621 2012 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 THADAQ6YHU6 1953 aa19.12■□□□□ 0.65
PRPF40B-215ENST00000551418 ZNF840PA6NDX5 716 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 F8VP50 259 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 CLDN5O00501 218 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 AKAP3O75969 853 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 DLATP10515 647 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 HNRNPLP14866 589 aaKnown RBP eCLIP19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 SLC6A11P48066 632 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 C2orf27AQ580R0 203 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 VSTM1Q6UX27 236 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 CCDC33Q8N5R6 958 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 FSIP1Q8NA03 581 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 MYCBPAPQ8TBZ2 947 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 USP33Q8TEY7 942 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 ELMO3Q96BJ8 720 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 TPSD1Q9BZJ3 242 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 SMPD4Q9NXE4 827 aa19.11■□□□□ 0.65
PRPF40B-215ENST00000551418 FOXD2O60548 495 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 APBB3O95704 486 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 TCF3P15923 654 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 GNL1P36915 607 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 DGKEP52429 567 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 STK38Q15208 465 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 DENND5BQ6ZUT9 1274 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 FILIP1Q7Z7B0 1213 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 WDR49Q8IV35 697 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 NELFCDQ8IXH7 590 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 ZNF507Q8TCN5 953 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 CCDC127Q96BQ5 260 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 DHX58Q96C10 678 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 TTLL2Q9BWV7 592 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 ZNF518BQ9C0D4 1074 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 AGPAT3Q9NRZ7 376 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 TRPM5Q9NZQ8 1165 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 EBF1Q9UH73 591 aa19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 R3HCC1Q9Y3T6 440 aaKnown RBP19.1■□□□□ 0.65
PRPF40B-215ENST00000551418 KIAA0391O15091 583 aaKnown RBP19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 ABL1P00519 1130 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 CYP17A1P05093 508 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 CHRM1P11229 460 aaPredicted RBP19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 PTPN1P18031 435 aaKnown RBP19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 BCKDHBP21953 392 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 CYP2J2P51589 502 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 ASIC1P78348 528 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 CREB5Q02930 508 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 TAF10Q12962 218 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 SURF1Q15526 300 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 SNRNP35Q16560 246 aaKnown RBP19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 EMC10Q5UCC4 262 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 SHC4Q6S5L8 630 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 HS2ST1Q7LGA3 356 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 ADGRG2Q8IZP9 1017 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 OR6B3Q8NGW1 331 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 PLEKHO2Q8TD55 490 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 B3GNT5Q9BYG0 378 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 TNMDQ9H2S6 317 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 ZDHHC4Q9NPG8 344 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 VPS45Q9NRW7 570 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 PCDHGA5Q9Y5G8 931 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 CPQQ9Y646 472 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 USP24Q9UPU5 2620 aa19.09■□□□□ 0.65
PRPF40B-215ENST00000551418 SPTLC2O15270 562 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 STX6O43752 255 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 TNNI1P19237 187 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 ANXA13P27216 316 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 PMLP29590 882 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 MYL6P60660 151 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 CYP24A1Q07973 514 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 IFRD2Q12894 506 aaPredicted RBP19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 NR1H3Q13133 447 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 PSMD6Q15008 389 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 ST3GAL2Q16842 350 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 FOXD4L5Q5VV16 416 aaPredicted RBP19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 TMEM92Q6UXU6 159 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 C12orf40Q86WS4 652 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 SCFD1Q8WVM8 642 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 FOXD4L4Q8WXT5 416 aaPredicted RBP19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 C8orf48Q96LL4 319 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 500.3 ms