RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	PRUNE1	Q86TP1	453 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	RSPH3	Q86UC2	560 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	ADGRF2	Q8IZF7	708 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	SMC1B	Q8NDV3	1235 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	CMAS	Q8NFW8	434 aa	Predicted RBP	12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	SLC35B2	Q8TB61	432 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	NKD2	Q969F2	451 aa	Predicted RBP	12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	HAUS1	Q96CS2	278 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	ZFP42	Q96MM3	310 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	CNPY3	Q9BT09	278 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	OSBPL7	Q9BZF2	842 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	PABPC3	Q9H361	631 aa	Known RBP	12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	ASNSD1	Q9NWL6	643 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	HESX1	Q9UBX0	185 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	DNPEP	Q9ULA0	475 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	ST3GAL5	Q9UNP4	418 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	EFR3B	Q9Y2G0	817 aa		12.09	□□□□□ -0.47
RAB5C-208	ENST00000551338	COL4A4	P53420	1690 aa	Predicted RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	SHOX2	O60902	331 aa	Predicted RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	GRAP2	O75791	330 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	RNF8	O76064	485 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	ENDOD1	O94919	500 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	SHBG	P04278	402 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	CD48	P09326	243 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	PDGFRB	P09619	1106 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	RARG	P13631	454 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	ELN	P15502	786 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	ITIH2	P19823	946 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	LMO2	P25791	158 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	TKT	P29401	623 aa	Known RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	CHKA	P35790	457 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	MLH1	P40692	756 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	RPL34	P49207	117 aa	Known RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	VPS41	P49754	854 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	ARSE	P51690	589 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	BCAT1	P54687	386 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	VCP	P55072	806 aa	Known RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	SLC6A3	Q01959	620 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	BST2	Q10589	180 aa	Known RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	ODF2	Q5BJF6	829 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	KCNT1	Q5JUK3	1230 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	SH3PXD2A	Q5TCZ1	1133 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	IZUMO3	Q5VZ72	239 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	KDM7A	Q6ZMT4	941 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	ALLC	Q8N6M5	410 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	TOP6BL	Q8N6T0	577 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	GLIS1	Q8NBF1	620 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	GSTCD	Q8NEC7	633 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	APPL2	Q8NEU8	664 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	STK32A	Q8WU08	396 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	LPP	Q93052	612 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	SNX25	Q9H3E2	840 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	SEMA4A	Q9H3S1	761 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	AGO3	Q9H9G7	860 aa	Known RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	CHST12	Q9NRB3	414 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	MIOS	Q9NXC5	875 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	RNF186	Q9NXI6	227 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	CACNG4	Q9UBN1	327 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	PCSK1N	Q9UHG2	260 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	USP18	Q9UMW8	372 aa		12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	DRG1	Q9Y295	367 aa	Known RBP	12.08	□□□□□ -0.48
RAB5C-208	ENST00000551338	RIPK2	O43353	540 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	MGEA5	O60502	916 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	HUS1	O60921	280 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	MYZAP	P0CAP1	466 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	PRKAR2A	P13861	404 aa	Known RBP	12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	PDGFRA	P16234	1089 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	NR1D1	P20393	614 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	IGFBP6	P24592	240 aa	Predicted RBP	12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	GNL1	P36915	607 aa	Predicted RBP	12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	SCNN1A	P37088	669 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	EIF3B	P55884	814 aa	Known RBP	12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	LILRA4	P59901	499 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	OTUD4	Q01804	1114 aa	Known RBP	12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	CAV1	Q03135	178 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	NOG	Q13253	232 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	BYSL	Q13895	437 aa	Known RBP	12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	DSC3	Q14574	896 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	SLMAP	Q14BN4	828 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	KCNA10	Q16322	511 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	CCDC142	Q17RM4	750 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	TRIM71	Q2Q1W2	868 aa	Known RBP	12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	KRT71	Q3SY84	523 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	CCDC14	Q49A88	953 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	DENND2C	Q68D51	928 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	ZNF365	Q70YC5	407 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	MRPL10	Q7Z7H8	261 aa	Known RBP	12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	CCDC89	Q8N998	374 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	ANKRD52	Q8NB46	1076 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	ACTL9	Q8TC94	416 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	HSPH1	Q92598	858 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	GAD1	Q99259	594 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	TRAIP	Q9BWF2	469 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	CYLD	Q9NQC7	956 aa		12.07	□□□□□ -0.48
RAB5C-208	ENST00000551338	ERICH4	A6NGS2	130 aa		12.06	□□□□□ -0.48
RAB5C-208	ENST00000551338	GOLGA6L10	A6NI86	522 aa		12.06	□□□□□ -0.48

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