RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 RSPO2Q6UXX9 243 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-213ENST00000550629 CD300LDQ6UXZ3 194 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 SESTD1Q86VW0 696 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 CCDC60Q8IWA6 550 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-213ENST00000550629 TPH2Q8IWU9 490 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 FAM126BQ8IXS8 530 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 RASSF8Q8NHQ8 419 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 ATP8B4Q8TF62 1192 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 ZNF669Q96BR6 464 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-213ENST00000550629 ZBTB8AQ96BR9 441 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 CCDC34Q96HJ3 373 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 DYDC2Q96IM9 177 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 EPSTI1Q96J88 318 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 CLIC6Q96NY7 704 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 UIMC1Q96RL1 719 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 PCYT2Q99447 389 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 GORASP1Q9BQQ3 440 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 BDH2Q9BUT1 245 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 SPATA9Q9BWV2 254 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 LRRC27Q9C0I9 530 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 NRBP2Q9NSY0 501 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 SPATA6Q9NWH7 488 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-213ENST00000550629 RGL1Q9NZL6 768 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 KCND2Q9NZV8 630 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 PPARGC1AQ9UBK2 798 aaKnown RBP6.36□□□□□ -1.39
SCAF11-213ENST00000550629 GABBR1Q9UBS5 961 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 DNM3Q9UQ16 869 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 NRCAMQ92823 1304 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 MYADML2A6NDP7 307 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 RRN3P2A6NIE6 340 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 HBP1O60381 514 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 MED24O75448 989 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 TADA3O75528 432 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 DGKIO75912 1065 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 STBD1O95210 358 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 EYA4O95677 639 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 MBD3O95983 291 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 TFRCP02786 760 aaKnown RBP6.35□□□□□ -1.39
SCAF11-213ENST00000550629 RPLP2P05387 115 aaKnown RBP6.35□□□□□ -1.39
SCAF11-213ENST00000550629 MYL1P05976 194 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 MYL3P08590 195 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 ZNF286BP0CG31 522 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 GNAT1P11488 350 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 COL6A1P12109 1028 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 PFKFB1P16118 471 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 CDC25AP30304 524 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 HOXC8P31273 242 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 YWHABP31946 246 aaKnown RBP6.35□□□□□ -1.39
SCAF11-213ENST00000550629 STAT6P42226 847 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 BEX3Q00994 111 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 PRKCEQ02156 737 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 CYP4A11Q02928 519 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 SMAD4Q13485 552 aaKnown RBP6.35□□□□□ -1.39
SCAF11-213ENST00000550629 PLCB4Q15147 1175 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 UGCGQ16739 394 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 KIAA0753Q2KHM9 967 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 SPATS1Q496A3 300 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 UTP14CQ5TAP6 766 aaKnown RBP6.35□□□□□ -1.39
SCAF11-213ENST00000550629 RRAGBQ5VZM2 374 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 STEAP3Q658P3 488 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 CNNM4Q6P4Q7 775 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 NFRKBQ6P4R8 1299 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 CXCL17Q6UXB2 119 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 USP49Q70CQ1 688 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 ANO5Q75V66 913 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 GGNQ86UU5 652 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 STK32CQ86UX6 486 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 ELOA2Q8IYF1 753 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-213ENST00000550629 C7orf31Q8N865 590 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 FSIP1Q8NA03 581 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 KAT2BQ92831 832 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 GLT1D1Q96MS3 346 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 TIGD1Q96MW7 591 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 SPATA25Q9BR10 227 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 JPH2Q9BR39 696 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-213ENST00000550629 TIPINQ9BVW5 301 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 JAM3Q9BX67 310 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 CCDC113Q9H0I3 377 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 EPB41L1Q9H4G0 881 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 DDX19AQ9NUU7 478 aaKnown RBP6.35□□□□□ -1.39
SCAF11-213ENST00000550629 TELO2Q9Y4R8 837 aa6.35□□□□□ -1.39
SCAF11-213ENST00000550629 MROH7Q68CQ1 1323 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 A0A0U1RQG5 324 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-213ENST00000550629 TCRBV5S2A0A599 114 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 MBLAC1A4D2B0 266 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-213ENST00000550629 ARHGEF35A5YM69 484 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 MAGEB2O15479 319 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 POLR2DO15514 142 aaKnown RBP6.34□□□□□ -1.39
SCAF11-213ENST00000550629 KINO60870 393 aaKnown RBP6.34□□□□□ -1.39
SCAF11-213ENST00000550629 SCP2P22307 547 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 PTGS1P23219 599 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 STAT5AP42229 794 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 SYKP43405 635 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 KCNC1P48547 511 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 RARRES1P49788 294 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 NDUFA8P51970 172 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 NFKB2Q00653 900 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 AMPD3Q01432 767 aa6.34□□□□□ -1.39
SCAF11-213ENST00000550629 PLP2Q04941 152 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms