RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 C4orf50Q6ZRC1 276 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 DYMQ7RTS9 669 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 OSTM1Q86WC4 334 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 SFR1Q86XK3 245 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 DNAJC19Q96DA6 116 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 TMX3Q96JJ7 454 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 MRPL44Q9H9J2 332 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 OLFML3Q9NRN5 406 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 RBAKQ9NYW8 714 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 EHD2Q9NZN4 543 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 MAGEC2Q9UBF1 373 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 EVLQ9UI08 416 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 SIX4Q9UIU6 781 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 CDH9Q9ULB4 789 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 ZMIZ1Q9ULJ6 1067 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 MMP17Q9ULZ9 603 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 INVSQ9Y283 1065 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 SNX9Q9Y5X1 595 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 MYMKA6NI61 221 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 C1QTNF9BB2RNN3 333 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 ATP2C2O75185 946 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 FAM163BP0C2L3 166 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 C1QTNF9P0C862 333 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 EIF2DP41214 584 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 SLC7A9P82251 487 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 ALCAMQ13740 583 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 KCNB1Q14721 858 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 SF3A1Q15459 793 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 MAPRE1Q15691 268 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 LARP1BQ659C4 914 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 USP49Q70CQ1 688 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 BRAPQ7Z569 592 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 SCN4BQ8IWT1 228 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 ADGRF2Q8IZF7 708 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 ZSWIM2Q8NEG5 633 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 RASSF8Q8NHQ8 419 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 EPSTI1Q96J88 318 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 TTLL2Q9BWV7 592 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 RNF38Q9H0F5 515 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 MYOFQ9NZM1 2061 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 FRYQ5TBA9 3013 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 PI4KAP42356 2102 aa10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 TNRC6BQ9UPQ9 1833 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-207ENST00000550051 ASCC3Q8N3C0 2202 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 PLXND1Q9Y4D7 1925 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 ZNF840PA6NDX5 716 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 UPK3BL1B0FP48 263 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 PATE3B3GLJ2 98 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 UPK3BL2E5RIL1 263 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 LEFTY2O00292 366 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 SLC9A3R1O14745 358 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 TNFRSF10BO14763 440 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 KIAA0391O15091 583 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 ALDH1A2O94788 518 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 OLFM2O95897 454 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 KRT19P08727 400 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 BCKDHBP21953 392 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 LMO2P25791 158 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 P2RY2P41231 377 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 TNFRSF4P43489 277 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 NOP14P78316 857 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 LMAN2Q12907 356 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 FOXC1Q12948 553 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 MYO1EQ12965 1108 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 RRAGBQ5VZM2 374 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 ANO7Q6IWH7 933 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 SV2BQ7L1I2 683 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 LPCAT2Q7L5N7 544 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 CYP2U1Q7Z449 544 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 CCDC33Q8N5R6 958 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 MDGA1Q8NFP4 955 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 KBTBD7Q8WVZ9 684 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 SAAL1Q96ER3 474 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 HPDLQ96IR7 371 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 PNKPQ96T60 521 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 ADAM33Q9BZ11 813 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 TPSD1Q9BZJ3 242 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 PDE11AQ9HCR9 933 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 INTS13Q9NVM9 706 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 TRPM5Q9NZQ8 1165 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 CCDC39Q9UFE4 941 aa10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 MYO18AQ92614 2054 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-207ENST00000550051 CEP192Q8TEP8 1941 aa10.52□□□□□ -0.72
TRAFD1-207ENST00000550051 FAM208BQ5VWN6 2430 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 CEP295Q9C0D2 2601 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 FRMD3A2A2Y4 597 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 ANTXRLA6NF34 631 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 HCRTO43612 131 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 GCNT3O95395 438 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 CYP17A1P05093 508 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 HNRNPLP14866 589 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 WARSP23381 471 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 BDNFP23560 247 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 GRIK1P39086 918 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 DPP6P42658 865 aa10.52□□□□□ -0.73
TRAFD1-207ENST00000550051 KIR2DL1P43626 348 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms