RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CNTN6Q9UQ52 1028 aa20.52■□□□□ 0.88
DDX54-207ENST00000550016 RNF225M0QZC1 329 aaPredicted RBP20.51■□□□□ 0.87
DDX54-207ENST00000550016 F11P03951 625 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 VDRP11473 427 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 TEAD2Q15562 447 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 ARHGAP15Q53QZ3 475 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 SGO2Q562F6 1265 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 FKBP15Q5T1M5 1219 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 NUP93Q8N1F7 819 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 RBBP8NLQ8NC74 664 aaPredicted RBP20.51■□□□□ 0.87
DDX54-207ENST00000550016 NXPE3Q969Y0 559 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 TTLL2Q9BWV7 592 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 DUSP16Q9BY84 665 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 IGSF9Q9P2J2 1179 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 MYO16Q9Y6X6 1858 aa20.51■□□□□ 0.87
DDX54-207ENST00000550016 ANHXE9PGG2 379 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 BEST1O76090 585 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 RTN3O95197 1032 aaPredicted RBP20.5■□□□□ 0.87
DDX54-207ENST00000550016 ATP1A3P13637 1013 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 CD19P15391 556 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 MAP3K7CLP57077 242 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 ARHGAP44Q17R89 818 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 SMYD5Q6GMV2 418 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 DPY19L2P1Q6NXN4 242 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 POTEHQ6S545 545 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 TMEM150AQ86TG1 271 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 ZMIZ2Q8NF64 920 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 DNAJC12Q9UKB3 198 aa20.5■□□□□ 0.87
DDX54-207ENST00000550016 LGALS16A8MUM7 142 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 DLL1O00548 723 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 TNFRSF10BO14763 440 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 KRT5P13647 590 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 ZNF132P52740 706 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 USP46P62068 366 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 CLEC20AQ6ZU45 233 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 MTSS1LQ765P7 747 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 APTXQ7Z2E3 356 aaKnown RBP20.49■□□□□ 0.87
DDX54-207ENST00000550016 ANKRD52Q8NB46 1076 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 ZSWIM3Q96MP5 696 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 LSM14BQ9BX40 385 aaKnown RBP20.49■□□□□ 0.87
DDX54-207ENST00000550016 SLITRK6Q9H5Y7 841 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 KCNK12Q9HB15 430 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 COMMD8Q9NX08 183 aa20.49■□□□□ 0.87
DDX54-207ENST00000550016 VCANP13611 3396 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 CUL9Q8IWT3 2517 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 ASGR2P07307 311 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 NPR3P17342 541 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 TPM4P67936 248 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 HTR4Q13639 388 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 PTPN21Q16825 1174 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 GPR158Q5T848 1215 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 KLHDC7AQ5VTJ3 777 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 LUZP1Q86V48 1076 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 SHC3Q92529 594 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 MRPS31Q92665 395 aaKnown RBP20.48■□□□□ 0.87
DDX54-207ENST00000550016 TASP1Q9H6P5 420 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 PNPLA8Q9NP80 782 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 PLCB1Q9NQ66 1216 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 IL37Q9NZH6 218 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 MUTYHQ9UIF7 546 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 ZMYM5Q9UJ78 669 aa20.48■□□□□ 0.87
DDX54-207ENST00000550016 HELZP42694 1942 aaKnown RBP20.47■□□□□ 0.87
DDX54-207ENST00000550016 SOBPA7XYQ1 873 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 HHLA1C9JL84 531 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 RFX1P22670 979 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 DDX6P26196 483 aaKnown RBP eCLIP20.47■□□□□ 0.87
DDX54-207ENST00000550016 YWHAQP27348 245 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 PPP3CCP48454 512 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 SLC8A3P57103 927 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 CYP4F8P98187 520 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 UBXN1Q04323 297 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 STILQ15468 1287 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 CNGA2Q16280 664 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 GOLGA7BQ2TAP0 167 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 FAM78AQ5JUQ0 283 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 STXBP5Q5T5C0 1151 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 PARM1Q6UWI2 310 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 LCLAT1Q6UWP7 414 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 SCAMP5Q8TAC9 235 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 ZSCAN18Q8TBC5 510 aaPredicted RBP20.47■□□□□ 0.87
DDX54-207ENST00000550016 RSAD2Q8WXG1 361 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 TFAP2BQ92481 460 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 KHSRPQ92945 711 aaKnown RBP eCLIP20.47■□□□□ 0.87
DDX54-207ENST00000550016 ASB16Q96NS5 453 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 UBXN6Q9BZV1 441 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 HESX1Q9UBX0 185 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 AJAP1Q9UKB5 411 aaPredicted RBP20.47■□□□□ 0.87
DDX54-207ENST00000550016 TSPAN16Q9UKR8 245 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 SORCS3Q9UPU3 1222 aa20.47■□□□□ 0.87
DDX54-207ENST00000550016 GOLGA6L19H0YKK7 550 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 O00370 1275 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 DCXO43602 365 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 TADA3O75528 432 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 USP8P40818 1118 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 SLC5A3P53794 718 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 BCAT1P54687 386 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 TAF10Q12962 218 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 TDGQ13569 410 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 LRSAM1Q6UWE0 723 aa20.46■□□□□ 0.87
DDX54-207ENST00000550016 TTC30AQ86WT1 665 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms