RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 SERPINB12Q96P63 405 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 KATNAL1Q9BW62 490 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 SP110Q9HB58 689 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 XPNPEP1Q9NQW7 623 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 SENP1Q9P0U3 644 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.63■□□□□ 0.09
CUX1-214ENST00000550008 OPLAHO14841 1288 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 FARP2O94887 1054 aaPredicted RBP15.63■□□□□ 0.09
CUX1-214ENST00000550008 SGSM3Q96HU1 749 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 SHCBP1LQ9BZQ2 653 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 ZFYVE28Q9HCC9 887 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 BARX2Q9UMQ3 279 aaPredicted RBP15.63■□□□□ 0.09
CUX1-214ENST00000550008 SMG5Q9UPR3 1016 aaKnown RBP15.63■□□□□ 0.09
CUX1-214ENST00000550008 NEMP1O14524 444 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 OPHN1O60890 802 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 PRAMEP78395 509 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 TRIM67Q6ZTA4 783 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 ZNF518BQ9C0D4 1074 aa15.63■□□□□ 0.09
CUX1-214ENST00000550008 PLA2G6O60733 806 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 RECQL4O94761 1208 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 LSM8O95777 96 aaKnown RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 VCPP55072 806 aaKnown RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 AP4E1Q9UPM8 1137 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 PCDHA2Q9Y5H9 948 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 CCT8L1PA6NM43 557 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 CHUKO15111 745 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 BANF1O75531 89 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 CCDC130P13994 396 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 AARSP49588 968 aaKnown RBP eCLIP15.62■□□□□ 0.093e-6■■■■■ 61.8
CUX1-214ENST00000550008 EFHC1Q5JVL4 640 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 LRRC6Q86X45 466 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 SLC25A41Q8N5S1 370 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 PPWD1Q96BP3 646 aaKnown RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 TTC1Q99614 292 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 SEPT5Q99719 369 aaPredicted RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 PRDM4Q9UKN5 801 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 ZNF214Q9UL59 606 aaPredicted RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 UBA6A0AVT1 1052 aaPredicted RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 TYW5A2RUC4 315 aaKnown RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 PMPCBO75439 489 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 ENO1P06733 434 aaKnown RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 ADSSP30520 456 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 CPT1AP50416 773 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 GEMIN4P57678 1058 aaKnown RBP15.62■□□□□ 0.09
CUX1-214ENST00000550008 CORO7P57737 925 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 CDC42EP1Q00587 391 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 DCAF4L1Q3SXM0 396 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 MIB1Q86YT6 1006 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 URGCPQ8TCY9 931 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 DTX3LQ8TDB6 740 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 SLC2A14Q8TDB8 520 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 MBOAT7Q96N66 472 aa15.62■□□□□ 0.09
CUX1-214ENST00000550008 KCNK1O00180 336 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 MAFO75444 373 aaPredicted RBP15.61■□□□□ 0.09
CUX1-214ENST00000550008 MX2P20592 715 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 STIP1P31948 543 aaKnown RBP15.61■□□□□ 0.09
CUX1-214ENST00000550008 OCRLQ01968 901 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 ACVR2BQ13705 512 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 LBX2Q6XYB7 198 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 PARP9Q8IXQ6 854 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 ACO2Q99798 780 aaKnown RBP15.61■□□□□ 0.09
CUX1-214ENST00000550008 FAM167BQ9BTA0 163 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 ABHD16BQ9H3Z7 469 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 AVENQ9NQS1 362 aaPredicted RBP15.61■□□□□ 0.09
CUX1-214ENST00000550008 ONECUT3O60422 494 aaPredicted RBP15.61■□□□□ 0.09
CUX1-214ENST00000550008 APOEP02649 317 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 NOMO3P69849 1222 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 NSUN2Q08J23 767 aaKnown RBP eCLIP15.61■□□□□ 0.09
CUX1-214ENST00000550008 ITPRIPL1Q6GPH6 555 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 TLK2Q86UE8 772 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 SGF29Q96ES7 293 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 RRAGCQ9HB90 399 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 SIX2Q9NPC8 291 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 NINJ2Q9NZG7 142 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 NUDT5Q9UKK9 219 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 SPECC1L-ADORA2AF8WAN1 911 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 RBAK-RBAKDNI3L0D1 243 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 LYPLA2O95372 231 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 PCSK1P29120 753 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 HOXD13P35453 343 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 COG7P83436 770 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 ADIGQ0VDE8 80 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 GLB1LQ6UWU2 654 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 NPNTQ6UXI9 565 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 HELQQ8TDG4 1101 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 IFT43Q96FT9 208 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 RMDN2Q96LZ7 410 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 PAFAH2Q99487 392 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 KRT82Q9NSB4 513 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 ALS2Q96Q42 1657 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 C2CD2LO14523 706 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 USP2O75604 605 aaPredicted RBP15.61■□□□□ 0.09
CUX1-214ENST00000550008 SNRPAP09012 282 aaKnown RBP15.61■□□□□ 0.09
CUX1-214ENST00000550008 MCF2P10911 925 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 GHRP10912 638 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 GCKP35557 465 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 ETFBP38117 255 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 MCL1Q07820 350 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 ART3Q13508 389 aa15.61■□□□□ 0.09
CUX1-214ENST00000550008 MGAT5BQ3V5L5 792 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms