RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 GORASP1Q9BQQ3 440 aa7.18□□□□□ -1.26
UBE2N-204ENST00000549833 TEKT3Q9BXF9 490 aa7.18□□□□□ -1.26
UBE2N-204ENST00000549833 CD244Q9BZW8 370 aa7.18□□□□□ -1.26
UBE2N-204ENST00000549833 FTOQ9C0B1 505 aaKnown RBP eCLIP7.18□□□□□ -1.26
UBE2N-204ENST00000549833 UNC45AQ9H3U1 944 aa7.18□□□□□ -1.26
UBE2N-204ENST00000549833 KCNMB3Q9NPA1 279 aa7.18□□□□□ -1.26
UBE2N-204ENST00000549833 TYW1Q9NV66 732 aaKnown RBP7.18□□□□□ -1.26
UBE2N-204ENST00000549833 COQ6Q9Y2Z9 468 aa7.18□□□□□ -1.26
UBE2N-204ENST00000549833 CLIC4Q9Y696 253 aa7.18□□□□□ -1.26
UBE2N-204ENST00000549833 TNRC18O15417 2968 aaPredicted RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 GBF1Q92538 1859 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 TRIOBPQ9H2D6 2365 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 DNM1LO00429 736 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 TBX3O15119 743 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 OPA1O60313 960 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 ZEB2O60315 1214 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 PSMD10O75832 226 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 BAG4O95429 457 aaKnown RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 LTFP02788 710 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 ASLP04424 464 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 LGALS2P05162 132 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 PDGFRBP09619 1106 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 OR52Z1P0C646 297 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 KRT15P19012 456 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 SOX5P35711 763 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 TCF7P36402 384 aaPredicted RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 CDKN1CP49918 316 aaPredicted RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 ACLYP53396 1101 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 ITGA1P56199 1179 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 ACTR2P61160 394 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 PSMC6P62333 389 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 PURAQ00577 322 aaKnown RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 CEBPZQ03701 1054 aaKnown RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 DGKDQ16760 1214 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 PAN2Q504Q3 1202 aaKnown RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 RILPL1Q5EBL4 403 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 NCAPH2Q6IBW4 605 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 CXCL17Q6UXB2 119 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 DDX53Q86TM3 631 aaKnown RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 PCSK9Q8NBP7 692 aaKnown RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 SH3RF2Q8TEC5 729 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 KAT2BQ92831 832 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 PAWRQ96IZ0 340 aaKnown RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 FAM20AQ96MK3 541 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 MTMR9Q96QG7 549 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 RIT2Q99578 217 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 C11orf84Q9BUA3 381 aaPredicted RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 SENP6Q9GZR1 1112 aaPredicted RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 ZSCAN16Q9H4T2 348 aaPredicted RBP7.17□□□□□ -1.26
UBE2N-204ENST00000549833 CAAP1Q9H8G2 361 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 TBC1D22BQ9NU19 505 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 ELP1O95163 1332 aa7.17□□□□□ -1.26
UBE2N-204ENST00000549833 ZNF561-AS1K7EIQ3 104 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 LRG1P02750 347 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 S100BP04271 92 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 CKMP06732 381 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 SUPT20HL2P0C7V6 817 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 COL6A1P12109 1028 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 FAHP16930 419 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 POU3F3P20264 500 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 GJA4P35212 333 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 ATP2C1P98194 919 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 PPP2R5CQ13362 524 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 ORC2Q13416 577 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 IL17AQ16552 155 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 VWA3BQ502W6 1294 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 BRDTQ58F21 947 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 CT47A1Q5JQC4 288 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 B3GNT9Q6UX72 402 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 ABHD15Q6UXT9 468 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 MIER3Q7Z3K6 550 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 UBE2Q1Q7Z7E8 422 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 PTRH1Q86Y79 214 aaKnown RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 CCDC60Q8IWA6 550 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 RBM12BQ8IXT5 1001 aaKnown RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 LINC00482Q8N8I6 264 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 LINC01356Q8N9X3 169 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 KYQ8NBH2 561 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 SEPT1Q8WYJ6 367 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 USP28Q96RU2 1077 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 TMEM209Q96SK2 561 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 PCYT2Q99447 389 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 C16orf70Q9BSU1 422 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 MTG1Q9BT17 334 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 C11orf49Q9H6J7 331 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 TTC12Q9H892 705 aaPredicted RBP7.16□□□□□ -1.26
UBE2N-204ENST00000549833 HSPBP1Q9NZL4 362 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 TCEAL9Q9UHQ7 104 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 ATP8A1Q9Y2Q0 1164 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 ATP23Q9Y6H3 246 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 PTPRSQ13332 1948 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 CITO14578 2027 aa7.16□□□□□ -1.26
UBE2N-204ENST00000549833 MAN2B1O00754 1011 aa7.15□□□□□ -1.26
UBE2N-204ENST00000549833 KPNA6O60684 536 aa7.15□□□□□ -1.26
UBE2N-204ENST00000549833 PPFIA4O75335 1185 aa7.15□□□□□ -1.26
UBE2N-204ENST00000549833 DNAJC8O75937 253 aaPredicted RBP7.15□□□□□ -1.26
UBE2N-204ENST00000549833 AMY2AP04746 511 aa7.15□□□□□ -1.26
UBE2N-204ENST00000549833 AMY2BP19961 511 aa7.15□□□□□ -1.26
UBE2N-204ENST00000549833 MARK3P27448 753 aa7.15□□□□□ -1.26
UBE2N-204ENST00000549833 MARCKSP29966 332 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms