RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 FOXP1Q9H334 677 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-206ENST00000549358 DNAAF2Q9NVR5 837 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-206ENST00000549358 LARSQ9P2J5 1176 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-206ENST00000549358 GTF3C4Q9UKN8 822 aa11.61□□□□□ -0.55
TRAFD1-206ENST00000549358 ARHGAP26Q9UNA1 814 aa11.61□□□□□ -0.55
TRAFD1-206ENST00000549358 KIAA1549LQ6ZVL6 1849 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 LEFTY2O00292 366 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 SCAMP3O14828 347 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 ADAM23O75077 832 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 KAT7O95251 611 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 SYPP08247 313 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 TCF3P15923 654 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 ACAT1P24752 427 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 ZNF33AQ06730 810 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 SV2CQ496J9 727 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 HSF5Q4G112 596 aaPredicted RBP11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 FILIP1Q7Z7B0 1213 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 SCN4BQ8IWT1 228 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 SPATA18Q8TC71 538 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 C8orf76Q96K31 380 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 CCSER1Q9C0I3 900 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 ASB7Q9H672 318 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 ABCB6Q9NP58 842 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 DDX43Q9NXZ2 648 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 NOL7Q9UMY1 257 aaKnown RBP11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 C2CD2Q9Y426 696 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 TSC2P49815 1807 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 CELSR3Q9NYQ7 3312 aa11.6□□□□□ -0.55
TRAFD1-206ENST00000549358 MYO16Q9Y6X6 1858 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 APODP05090 189 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 CYP17A1P05093 508 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 KIR2DL1P43626 348 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 TRAPPC10P48553 1259 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 SLC12A3P55017 1021 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 ATP2C1P98194 919 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 SLC14A1Q13336 389 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 DHCR24Q15392 516 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 ARSHQ5FYA8 562 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 SLC36A4Q6YBV0 504 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 DTHD1Q6ZMT9 781 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 RABEPKQ7Z6M1 372 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 SPATA2LQ8IUW3 424 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 PDCL2Q8N4E4 241 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 GLIS3Q8NEA6 775 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 ADAM32Q8TC27 787 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 LEO1Q8WVC0 666 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 PNMA5Q96PV4 448 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 ACBD6Q9BR61 282 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 ARHGEF4Q9NR80 690 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 PCDHB6Q9Y5E3 794 aa11.59□□□□□ -0.55
TRAFD1-206ENST00000549358 A0A0A0MRY4 1105 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 K7ENM7 598 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 PIGRP01833 764 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 PLA2G4BP0C869 781 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 GABRG2P18507 467 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 GRIA2P42262 883 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 TNFRSF4P43489 277 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 TOB1P50616 345 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 PDE6CP51160 858 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 KDSRQ06136 332 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 RESTQ13127 1097 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 CCDC142Q17RM4 750 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 PLEKHG6Q3KR16 790 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 INTS6LQ5JSJ4 861 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 ADALQ6DHV7 355 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 SLC39A4Q6P5W5 647 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 RHBDF2Q6PJF5 856 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 SLCO6A1Q86UG4 719 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 C12orf40Q86WS4 652 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 NAXDQ8IW45 347 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 MYCT1Q8N699 235 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 SMPD4Q9NXE4 827 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 KCND2Q9NZV8 630 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 L1RE1Q9UN81 338 aa11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 APOBEC2Q9Y235 224 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 TNRC6BQ9UPQ9 1833 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-206ENST00000549358 IGSF10Q6WRI0 2623 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 A0A1W2PQD8 194 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 TBC1D3BA6NDS4 549 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 TISP43B9A030 160 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 ANKRD63C9JTQ0 380 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 HCRTO43612 131 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 HUS1O60921 280 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 GJB3O75712 270 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 EIF2DP41214 584 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 MYL7Q01449 175 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 C19orf57Q0VDD7 668 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 ST3GAL1Q11201 340 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 CFAP221Q4G0U5 840 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 TOGARAM2Q6ZUX3 1019 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 SLC41A1Q8IVJ1 513 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 RGL4Q8IZJ4 473 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 TRIML1Q8N9V2 468 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 FBXO18Q8NFZ0 1043 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 KCNN1Q92952 543 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 HSPA12BQ96MM6 686 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 ZNF560Q96MR9 790 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 PKMYT1Q99640 499 aa11.57□□□□□ -0.56
TRAFD1-206ENST00000549358 RNF38Q9H0F5 515 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms