RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 ADAM9Q13443 819 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 RUNX3Q13761 415 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 PPP2R5DQ14738 602 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 PDGFRLQ15198 375 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 ZCWPW2Q504Y3 356 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 TXNDC11Q6PKC3 985 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 ADSSL1Q8N142 457 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 SLC22A12Q96S37 553 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 CYP2S1Q96SQ9 504 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 B3GNT5Q9BYG0 378 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 TRPC7Q9HCX4 862 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 ZSCAN32Q9NX65 697 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 TRPM5Q9NZQ8 1165 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 KIF26AQ9ULI4 1882 aaPredicted RBP19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 DMDP11532 3685 aa19.85■□□□□ 0.77
CHMP1A-207ENST00000549328 KINO60870 393 aaKnown RBP19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 CLSTN1O94985 981 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 KRT13P13646 458 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 TCF3P15923 654 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 HDCP19113 662 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 USP46P62068 366 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 AMPD2Q01433 879 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 EDRF1Q3B7T1 1238 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 FAM186BQ8IYM0 893 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 SYNPOQ8N3V7 929 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 SPEM1Q8N4L4 309 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 ARL14EPQ8N8R7 260 aaPredicted RBP19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 TTC8Q8TAM2 541 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 ATRIPQ8WXE1 791 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 ZNF518BQ9C0D4 1074 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 SDCBP2Q9H190 292 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 HPS4Q9NQG7 708 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 RMND1Q9NWS8 449 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 ANAPC1Q9H1A4 1944 aa19.84■□□□□ 0.77
CHMP1A-207ENST00000549328 ATP8B3O60423 1300 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 C2orf78A6NCI8 922 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 HLA-DRAP01903 254 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 CACNA2D1P54289 1103 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 NRLP54845 237 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 MTF1Q14872 753 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 PON2Q15165 354 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 ZNF77Q15935 545 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 UNC93AQ86WB7 457 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 CRYBG2Q8N1P7 616 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 ENGASEQ8NFI3 743 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 RIN3Q8TB24 985 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 SLITRK1Q96PX8 696 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 GSDMAQ96QA5 445 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 EBF3Q9H4W6 596 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 TMEM30AQ9NV96 361 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 ARHGAP26Q9UNA1 814 aa19.83■□□□□ 0.77
CHMP1A-207ENST00000549328 CFAP54Q96N23 3096 aa19.83■□□□□ 0.76
CHMP1A-207ENST00000549328 EP300Q09472 2414 aaPredicted RBP19.83■□□□□ 0.76
CHMP1A-207ENST00000549328 GVINP1Q7Z2Y8 2422 aa19.83■□□□□ 0.76
CHMP1A-207ENST00000549328 ZNF840PA6NDX5 716 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 CLDN5O00501 218 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 LILRB5O75023 590 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 RTN3O95197 1032 aaPredicted RBP19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 PIK3CAP42336 1068 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 RAP1GAPP47736 663 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 CXCL12P48061 93 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 USP4Q13107 963 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 PNOCQ13519 176 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 CCINQ13939 588 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 GAS6Q14393 721 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 COBLL1Q53SF7 1204 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 WDR44Q5JSH3 913 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 TRIM68Q6AZZ1 485 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 TSSK4Q6SA08 328 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 SCARA5Q6ZMJ2 495 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 PAQR9Q6ZVX9 377 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 NUP93Q8N1F7 819 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 KIAA1958Q8N8K9 716 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 SUMF1Q8NBK3 374 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 OSCP1Q8WVF1 389 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 TIGD1Q96MW7 591 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 GTPBP4Q9BZE4 634 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 IMPG2Q9BZV3 1241 aa19.82■□□□□ 0.76
CHMP1A-207ENST00000549328 OTOL1A6NHN0 477 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 TRDMT1O14717 391 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 PAPSS2O95340 614 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 TDGF1P13385 188 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 GTF2H1P32780 548 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 ASPAP45381 313 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 GCLMP48507 274 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 PPP3CAQ08209 521 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 TAF10Q12962 218 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 ACOT1Q86TX2 421 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 FAM35AQ86V20 835 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 SPATA20Q8TB22 786 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 SH3RF2Q8TEC5 729 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 OVCA2Q8WZ82 227 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 ELMO3Q96BJ8 720 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 SMARCD1Q96GM5 515 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 CYP3A43Q9HB55 503 aa19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 DMAP1Q9NPF5 467 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 RBM12Q9NTZ6 932 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 DUS2Q9NX74 493 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 HOOK1Q9UJC3 728 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-207ENST00000549328 SMC2O95347 1197 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms