RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 NCANO14594 1321 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 TICRRQ7Z2Z1 1910 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 F8VP50 259 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 SMC2O95347 1197 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 DLG4P78352 724 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 RUNX3Q13761 415 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 UNC93AQ86WB7 457 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 FMR1NBQ8N0W7 255 aaPredicted RBP12.12□□□□□ -0.47
BEST3-209ENST00000548658 SPEM1Q8N4L4 309 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 KIAA1958Q8N8K9 716 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 MS4A3Q96HJ5 214 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 ZFYVE19Q96K21 471 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 TIGD1Q96MW7 591 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 SMG9Q9H0W8 520 aaKnown RBP12.12□□□□□ -0.47
BEST3-209ENST00000548658 GOLPH3LQ9H4A5 285 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 TRPC7Q9HCX4 862 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 PRMT8Q9NR22 394 aaPredicted RBP12.12□□□□□ -0.47
BEST3-209ENST00000548658 ZSCAN32Q9NX65 697 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 MAPK8IP1Q9UQF2 711 aa12.12□□□□□ -0.47
BEST3-209ENST00000548658 PTPRZ1P23471 2315 aaPredicted RBP12.12□□□□□ -0.47
BEST3-209ENST00000548658 DENND4CQ5VZ89 1909 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 ZFHX2Q9C0A1 2572 aaPredicted RBP12.11□□□□□ -0.47
BEST3-209ENST00000548658 CETN3O15182 167 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 STX10O60499 249 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 AKAP3O75969 853 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 RTN3O95197 1032 aaPredicted RBP12.11□□□□□ -0.47
BEST3-209ENST00000548658 VNN1O95497 513 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 ASS1P00966 412 aaKnown RBP12.11□□□□□ -0.47
BEST3-209ENST00000548658 TCF3P15923 654 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 GTF2H1P32780 548 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 PIK3CAP42336 1068 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 CXCL12P48061 93 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 NR1H3Q13133 447 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 CCDC142Q17RM4 750 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 FAM186BQ8IYM0 893 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 ADSSL1Q8N142 457 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 NUP93Q8N1F7 819 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 CRYBG2Q8N1P7 616 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 ZBTB44Q8NCP5 570 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 PDZD8Q8NEN9 1154 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 OVCA2Q8WZ82 227 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 NELL1Q92832 810 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 SMARCD1Q96GM5 515 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 FAXDC2Q96IV6 333 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 CYP2S1Q96SQ9 504 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 DPEP3Q9H4B8 488 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 COMMD8Q9NX08 183 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 ARHGAP26Q9UNA1 814 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 CCL26Q9Y258 94 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 R4GN57 208 aa12.11□□□□□ -0.47
BEST3-209ENST00000548658 ZNF638Q14966 1978 aaKnown RBP12.1□□□□□ -0.47
BEST3-209ENST00000548658 USP34Q70CQ2 3546 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 ZNF840PA6NDX5 716 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 ATG13O75143 517 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 TADA3O75528 432 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 YWHAQP27348 245 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 SOX9P48436 509 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 CDH8P55286 799 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 MCCD1P59942 119 aaPredicted RBP12.1□□□□□ -0.47
BEST3-209ENST00000548658 TNK2Q07912 1038 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 GRSF1Q12849 480 aaKnown RBP eCLIP12.1□□□□□ -0.47
BEST3-209ENST00000548658 MTF1Q14872 753 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 COBLL1Q53SF7 1204 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 ZNF658Q5TYW1 1059 aaPredicted RBP12.1□□□□□ -0.47
BEST3-209ENST00000548658 KRT39Q6A163 491 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 ELOA2Q8IYF1 753 aaPredicted RBP12.1□□□□□ -0.47
BEST3-209ENST00000548658 CPA6Q8N4T0 437 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 TTC39CQ8N584 583 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 ARL14EPQ8N8R7 260 aaPredicted RBP12.1□□□□□ -0.47
BEST3-209ENST00000548658 STKLD1Q8NE28 680 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 CCDC26Q8TAB7 109 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 OSCP1Q8WVF1 389 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 ATP2A3Q93084 1043 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 TSG101Q99816 390 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 MED10Q9BTT4 135 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 B3GNT5Q9BYG0 378 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 ZNF518BQ9C0D4 1074 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 EBF3Q9H4W6 596 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 SMYD3Q9H7B4 428 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 CYP3A43Q9HB55 503 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 DUS2Q9NX74 493 aaKnown RBP12.1□□□□□ -0.47
BEST3-209ENST00000548658 GCNT4Q9P109 453 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 NME7Q9Y5B8 376 aa12.1□□□□□ -0.47
BEST3-209ENST00000548658 COL4A2P08572 1712 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 RIF1Q5UIP0 2472 aaKnown RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 C2orf78A6NCI8 922 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 PAPSS2O95340 614 aaPredicted RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 ABL1P00519 1130 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 HLA-DRAP01903 254 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 EPB41P11171 864 aaKnown RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 PPP1R2P41236 205 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 GCLMP48507 274 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 IFNAR2P48551 515 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 USP46P62068 366 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 SLC7A9P82251 487 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 FKBP3Q00688 224 aaKnown RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 TAF10Q12962 218 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 PNOCQ13519 176 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms