RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 EGFP01133 1207 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 CNR2P34972 360 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 GJA4P35212 333 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 GRIK1P39086 918 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 CASP4P49662 377 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 CACNA2D1P54289 1103 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 MYL6P60660 151 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 TNNC1P63316 161 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 EML3Q32P44 896 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 WDR72Q3MJ13 1102 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 WDR5BQ86VZ2 330 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 OR6B3Q8NGW1 331 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 SH3RF2Q8TEC5 729 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 ATP2A3Q93084 1043 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 SNX25Q9H3E2 840 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 ECT2Q9H8V3 914 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 FBRSL1Q9HCM7 1045 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 DUS2Q9NX74 493 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 SERTAD1Q9UHV2 236 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 CFAP45Q9UL16 551 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 EXOC3O60645 756 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 RNF40O75150 1001 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 RETP07949 1114 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 FAM163BP0C2L3 166 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 SLFN14P0C7P3 912 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 ANXA13P27216 316 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 GNL1P36915 607 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 IFNAR2P48551 515 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 NOP14P78316 857 aaKnown RBP18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 AMPD2Q01433 879 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 SPEM2Q0P670 501 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 TDRD10Q5VZ19 366 aaKnown RBP18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 CEP57L1Q8IYX8 460 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 TTC16Q8NEE8 873 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 GOLGA5Q8TBA6 731 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 EZH1Q92800 747 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 C8orf48Q96LL4 319 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 P2RY13Q9BPV8 354 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 ZNF518BQ9C0D4 1074 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 ELOVL4Q9GZR5 314 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 SMYD3Q9H7B4 428 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 RCOR1Q9UKL0 485 aa18.55■□□□□ 0.56
CHMP1A-205ENST00000548650 LRRIQ3A6PVS8 624 aaPredicted RBP18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 PRR5-ARHGAP8B1AHC4 643 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 OLFM2O95897 454 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 PFKLP17858 780 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 PTPN1P18031 435 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 HDCP19113 662 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 ATICP31939 592 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 PDE6CP51160 858 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 CLDN10P78369 228 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 ARHGAP8P85298 464 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 ZXDBP98169 803 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 STK4Q13043 487 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 TRPC3Q13507 836 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 B3GALNT2Q8NCR0 500 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 SYAP1Q96A49 352 aaPredicted RBP18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 VRTNQ9H8Y1 702 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 TRPM5Q9NZQ8 1165 aa18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 NXF1Q9UBU9 619 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-205ENST00000548650 ZNF840PA6NDX5 716 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 LRP3O75074 770 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 PFKFB1P16118 471 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 DRD1P21728 446 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 GALK1P51570 392 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 ZNF699Q32M78 642 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 SPRYD3Q8NCJ5 442 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 PARD3BQ8TEW8 1205 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 TMEM174Q8WUU8 243 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 PAGE5Q96GU1 130 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 B3GNT5Q9BYG0 378 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 KCTD10Q9H3F6 313 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 EXOC1Q9NV70 894 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 DMAC2Q9NW81 257 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 EHD2Q9NZN4 543 aa18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 CDV3Q9UKY7 258 aaKnown RBP18.53■□□□□ 0.56
CHMP1A-205ENST00000548650 SDK1Q7Z5N4 2213 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 CCDC163A0A0D9SF12 145 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 A8MXQ7 604 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 CLDN5O00501 218 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 ATG13O75143 517 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 VNN1O95497 513 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 OAS1P00973 400 aaKnown RBP18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 SDHBP21912 280 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 RAP1GAPP47736 663 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 PXNP49023 591 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 SLC7A9P82251 487 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 BIRC3Q13489 604 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 KMT5BQ4FZB7 885 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 FBXO43Q4G163 708 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 SLC9A9Q8IVB4 645 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 FAM160A2Q8N612 972 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 CD101Q93033 1021 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 CHAMP1Q96JM3 812 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 LINC00597Q9H2U6 94 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 POLR3BQ9NW08 1133 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 HPSEQ9Y251 543 aa18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.52■□□□□ 0.56
CHMP1A-205ENST00000548650 MYH10P35580 1976 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 281.9 ms