RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 FAM35AQ86V20 835 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 SPEM1Q8N4L4 309 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 ARL14EPQ8N8R7 260 aaPredicted RBP13.28□□□□□ -0.28
GCN1-204ENST00000548132 B3GALNT2Q8NCR0 500 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 RUBCNQ92622 972 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 RMDN1Q96DB5 314 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 CYP2S1Q96SQ9 504 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 MMS19Q96T76 1030 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 GDPD2Q9HCC8 539 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 FBRSL1Q9HCM7 1045 aaKnown RBP13.28□□□□□ -0.28
GCN1-204ENST00000548132 TRPC7Q9HCX4 862 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 PARD6AQ9NPB6 346 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 GKN1Q9NS71 199 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 UXTQ9UBK9 157 aaPredicted RBP13.28□□□□□ -0.28
GCN1-204ENST00000548132 ARHGAP26Q9UNA1 814 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 WNT6Q9Y6F9 365 aa13.28□□□□□ -0.28
GCN1-204ENST00000548132 MUC22E2RYF6 1773 aaPredicted RBP13.27□□□□□ -0.28
GCN1-204ENST00000548132 NUP205Q92621 2012 aa13.27□□□□□ -0.28
GCN1-204ENST00000548132 PDXKO00764 312 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 OAS1P00973 400 aaKnown RBP13.27□□□□□ -0.29
GCN1-204ENST00000548132 RPN1P04843 607 aaKnown RBP13.27□□□□□ -0.29
GCN1-204ENST00000548132 CKMP06732 381 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 TNNC1P63316 161 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 CYP27A1Q02318 531 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 SRSF5Q13243 272 aaKnown RBP13.27□□□□□ -0.29
GCN1-204ENST00000548132 RUNX3Q13761 415 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 NCOA4Q13772 614 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 TAF12Q16514 161 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 ZNF699Q32M78 642 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 SPOPLQ6IQ16 392 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 C1orf228Q6PIY5 440 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 KIAA2013Q8IYS2 634 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 FSIP1Q8NA03 581 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 GOLGA5Q8TBA6 731 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 ZFRQ96KR1 1074 aaKnown RBP13.27□□□□□ -0.29
GCN1-204ENST00000548132 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 TWNKQ96RR1 684 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 APOBEC3GQ9HC16 384 aaKnown RBP13.27□□□□□ -0.29
GCN1-204ENST00000548132 POLR3BQ9NW08 1133 aaPredicted RBP13.27□□□□□ -0.29
GCN1-204ENST00000548132 MAGEC2Q9UBF1 373 aaPredicted RBP13.27□□□□□ -0.29
GCN1-204ENST00000548132 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.29
GCN1-204ENST00000548132 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.29
GCN1-204ENST00000548132 TRAV19A0A0A6YYK7 116 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 A0A1W2PQ27 194 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 A0A1W2PQ64 194 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 A0A1W2PQD8 194 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 ZNF840PA6NDX5 716 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 CHURC1-FNTBB4DL54 471 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
GCN1-204ENST00000548132 TNFRSF10BO14763 440 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 TRIM66O15016 1216 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 ASS1P00966 412 aaKnown RBP13.26□□□□□ -0.29
GCN1-204ENST00000548132 EGFP01133 1207 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 MYL1P05976 194 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 TRIM49P0CI25 452 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 TRIM49CP0CI26 452 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 PTPN1P18031 435 aaKnown RBP13.26□□□□□ -0.29
GCN1-204ENST00000548132 ATICP31939 592 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 GJA4P35212 333 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 SYKP43405 635 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 FNTBP49356 437 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 PGFP49763 221 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 MESP2Q0VG99 397 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 ORC1Q13415 861 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 MAPRE1Q15691 268 aaKnown RBP13.26□□□□□ -0.29
GCN1-204ENST00000548132 NFIL3Q16649 462 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 DGKKQ5KSL6 1271 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 KRBA2Q6ZNG9 492 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 FUKQ8N0W3 1084 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 SH3RF2Q8TEC5 729 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 OSCP1Q8WVF1 389 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 SYAP1Q96A49 352 aaPredicted RBP13.26□□□□□ -0.29
GCN1-204ENST00000548132 CEP295NLQ96MC4 621 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 FAM126AQ9BYI3 521 aaPredicted RBP13.26□□□□□ -0.29
GCN1-204ENST00000548132 ELOVL4Q9GZR5 314 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
GCN1-204ENST00000548132 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 AKAP3O75969 853 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 CYP17A1P05093 508 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 FAM163BP0C2L3 166 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 USP17L7P0C7H9 530 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 CCDC130P13994 396 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 GNL1P36915 607 aaPredicted RBP13.25□□□□□ -0.29
GCN1-204ENST00000548132 MCCD1P59942 119 aaPredicted RBP13.25□□□□□ -0.29
GCN1-204ENST00000548132 SLC7A9P82251 487 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 PPP3CAQ08209 521 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 PSMD2Q13200 908 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 BIRC3Q13489 604 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 PDGFRLQ15198 375 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 SV2AQ7L0J3 742 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 SMYD4Q8IYR2 804 aaPredicted RBP13.25□□□□□ -0.29
GCN1-204ENST00000548132 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 RNF38Q9H0F5 515 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 SNX25Q9H3E2 840 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 ECT2Q9H8V3 914 aa13.25□□□□□ -0.29
GCN1-204ENST00000548132 FAM92AA1XBS5 289 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms