RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 FAM114A2Q9NRY5 505 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 CNTN3Q9P232 1028 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PCYOX1Q9UHG3 505 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 RASAL2Q9UJF2 1139 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 MTUS1Q9ULD2 1270 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 PIN4Q9Y237 131 aaKnown RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 USTQ9Y2C2 406 aa8.54□□□□□ -1.04
CCDC65-203ENST00000547861 UTP11Q9Y3A2 253 aaKnown RBP8.54□□□□□ -1.04
CCDC65-203ENST00000547861 BDP1A6H8Y1 2624 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 M0QYV0 167 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 RNF40O75150 1001 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 FGBP02675 491 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 TCF4P15884 667 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 CYP3A5P20815 502 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 COILP38432 576 aaPredicted RBP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 FNTAP49354 379 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 NDST1P52848 882 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 YARSP54577 528 aaKnown RBP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 TAP1Q03518 808 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 TERF2Q15554 542 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 GLRA4Q5JXX5 417 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 UBXN11Q5T124 520 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 CCDC137Q6PK04 289 aaKnown RBP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 BEST2Q8NFU1 509 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 HERVK_113Q902F9 699 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 MAGOHBQ96A72 148 aaKnown RBP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 C18orf25Q96B23 403 aaPredicted RBP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 TMEM176AQ96HP8 235 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 ZIM3Q96PE6 472 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 CPXM1Q96SM3 734 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 TRIM31Q9BZY9 425 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 TRIM6Q9C030 488 aaPredicted RBP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 FAM124BQ9H5Z6 455 aaPredicted RBP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 VPS18Q9P253 973 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 STRIP2Q9ULQ0 834 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 BARX2Q9UMQ3 279 aaPredicted RBP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCDC65-203ENST00000547861 TRANK1O15050 2925 aa8.53□□□□□ -1.04
CCDC65-203ENST00000547861 GBF1Q92538 1859 aa8.52□□□□□ -1.04
CCDC65-203ENST00000547861 REV3LO60673 3130 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 GOLGA8SH3BPF8 625 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 HSF2BPO75031 334 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 ERBB2P04626 1255 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 VDRP11473 427 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 SSR1P43307 286 aaKnown RBP8.52□□□□□ -1.05
CCDC65-203ENST00000547861 CRYBB1P53674 252 aaPredicted RBP8.52□□□□□ -1.05
CCDC65-203ENST00000547861 GYS2P54840 703 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 MYO1EQ12965 1108 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 PDCLQ13371 301 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 LAPTM4AQ15012 233 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 LLGL1Q15334 1064 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 ZBTB6Q15916 424 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 SGO2Q562F6 1265 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 ALS2CLQ60I27 953 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 DCUN1D2Q6PH85 259 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 ALKAL1Q6UXT8 129 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 OTOP2Q7RTS6 562 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 FAM228AQ86W67 206 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 XYLT1Q86Y38 959 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 CCDC50Q8IVM0 306 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 TTC39CQ8N584 583 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 LRRC52Q8N7C0 313 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 C7orf31Q8N865 590 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 NIPA2Q8N8Q9 360 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 PPM1EQ8WY54 764 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 PIK3R5Q8WYR1 880 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 RUNDC3BQ96NL0 473 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
CCDC65-203ENST00000547861 SH3GL2Q99962 352 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 MRPL45Q9BRJ2 306 aaKnown RBP8.52□□□□□ -1.05
CCDC65-203ENST00000547861 ERP44Q9BS26 406 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 MTG1Q9BT17 334 aaPredicted RBP8.52□□□□□ -1.05
CCDC65-203ENST00000547861 PRDM12Q9H4Q4 367 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 METTL5Q9NRN9 209 aaKnown RBP8.52□□□□□ -1.05
CCDC65-203ENST00000547861 KLHL11Q9NVR0 708 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 LCMT1Q9UIC8 334 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 MSRAQ9UJ68 235 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 NME7Q9Y5B8 376 aa8.52□□□□□ -1.05
CCDC65-203ENST00000547861 KPNA6O60684 536 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 KRT1P04264 644 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 RALAP11233 206 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 GNAT1P11488 350 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 AKAP5P24588 427 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 FLT3P36888 993 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 RPL21P46778 160 aaKnown RBP8.51□□□□□ -1.05
CCDC65-203ENST00000547861 PSMC1P62191 440 aaKnown RBP8.51□□□□□ -1.05
CCDC65-203ENST00000547861 MRPS6P82932 125 aaKnown RBP8.51□□□□□ -1.05
CCDC65-203ENST00000547861 KLF1Q13351 362 aaPredicted RBP8.51□□□□□ -1.05
CCDC65-203ENST00000547861 UAP1Q16222 522 aaPredicted RBP8.51□□□□□ -1.05
CCDC65-203ENST00000547861 GOLGA7BQ2TAP0 167 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 CFAP58Q5T655 872 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 C9orf57Q5W0N0 161 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 TMC3Q7Z5M5 1100 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 ANKS1BQ7Z6G8 1248 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 EXD1Q8NHP7 514 aa8.51□□□□□ -1.05
CCDC65-203ENST00000547861 JOSD2Q8TAC2 188 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms