RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 TDRD10Q5VZ19 366 aaKnown RBP24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 TRAPPC11Q7Z392 1133 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 LIMS2Q7Z4I7 341 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 RDH13Q8NBN7 331 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 TSTD1Q8NFU3 115 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 MYCBPAPQ8TBZ2 947 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 KBTBD7Q8WVZ9 684 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 SLITRK1Q96PX8 696 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 KBTBD4Q9NVX7 518 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 MTMR6Q9Y217 621 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 CACNA1BQ00975 2339 aa24.63■■□□□ 1.53
SMARCD1-204ENST00000547637 HCRTO43612 131 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 PPP6R2O75170 966 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 ABL1P00519 1130 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 DLATP10515 647 aaKnown RBP24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 HOXC13P31276 330 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 TRPC3Q13507 836 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 SNRNP35Q16560 246 aaKnown RBP24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 USP39Q53GS9 565 aaKnown RBP24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 LINC00301Q8NCQ3 95 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 ZNF507Q8TCN5 953 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 FAM84AQ96KN4 292 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 TRIM9Q9C026 710 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 LINC00597Q9H2U6 94 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 CRTAC1Q9NQ79 661 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 ANAPC1Q9H1A4 1944 aa24.62■■□□□ 1.53
SMARCD1-204ENST00000547637 TACC1O75410 805 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 GBP1P32455 592 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 CCDC6Q16204 474 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 PLA2G2CQ5R387 149 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 FAM26FQ5R3K3 315 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 SCARA3Q6AZY7 606 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 DDX42Q86XP3 938 aaKnown RBP eCLIP24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 PCED1BQ96HM7 432 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 C8orf48Q96LL4 319 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 CGNQ9P2M7 1197 aaKnown RBP24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 UBE4BO95155 1302 aa24.61■■□□□ 1.53
SMARCD1-204ENST00000547637 LEFTY2O00292 366 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 NOP14P78316 857 aaKnown RBP24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 CREB5Q02930 508 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 CCDC142Q17RM4 750 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 WDR72Q3MJ13 1102 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 MDH1BQ5I0G3 518 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 STPG1Q5TH74 334 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 XXYLT1Q8NBI6 393 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 DHX58Q96C10 678 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 TTLL2Q9BWV7 592 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 ELOVL4Q9GZR5 314 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 DUSP15Q9H1R2 295 aaPredicted RBP24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 MAGEF1Q9HAY2 307 aa24.6■■□□□ 1.53
SMARCD1-204ENST00000547637 CNOT1A5YKK6 2376 aaKnown RBP24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 ALDH1A2O94788 518 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 PDIA4P13667 645 aaKnown RBP24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 PTPN1P18031 435 aaKnown RBP24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 SLC7A9P82251 487 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 PSMD6Q15008 389 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 RNF43Q68DV7 783 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 HPS3Q969F9 1004 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 SYAP1Q96A49 352 aaPredicted RBP24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 CCDC127Q96BQ5 260 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 CGRRF1Q99675 332 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 AGPAT3Q9NRZ7 376 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 ACACBO00763 2458 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 PTPRJQ12913 1337 aa24.59■■□□□ 1.53
SMARCD1-204ENST00000547637 ZNF840PA6NDX5 716 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 A8MXQ7 604 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 F8VP50 259 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 CUTAO60888 179 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 PHACTR2O75167 634 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 CLSTN1O94985 981 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 CST3P01034 146 aaPredicted RBP24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 ATICP31939 592 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 CYP2J2P51589 502 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 MRPS21P82921 87 aaKnown RBP24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 C2orf27AQ580R0 203 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 NAIF1Q69YI7 327 aaPredicted RBP24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 CNNM4Q6P4Q7 775 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 PDZD8Q8NEN9 1154 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 C7orf25Q9BPX7 421 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 FOXD4L1Q9NU39 408 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 POLR3BQ9NW08 1133 aaPredicted RBP24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 TBC1D14Q9P2M4 693 aa24.58■■□□□ 1.53
SMARCD1-204ENST00000547637 ATP8B3O60423 1300 aa24.58■■□□□ 1.52
SMARCD1-204ENST00000547637 RTN3O95197 1032 aaPredicted RBP24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 YEATS4O95619 227 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 CAVIN2O95810 425 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 SEC13P55735 322 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 CYP24A1Q07973 514 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 TAF10Q12962 218 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 EPM2AIP1Q7L775 607 aaPredicted RBP24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 ADGRG2Q8IZP9 1017 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 GLIS3Q8NEA6 775 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 USP33Q8TEY7 942 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 MRPL45Q9BRJ2 306 aaKnown RBP24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 TFIP11Q9UBB9 837 aaKnown RBP24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 ANGPTL2Q9UKU9 493 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 CPQQ9Y646 472 aa24.57■■□□□ 1.52
SMARCD1-204ENST00000547637 K7ELQ4 463 aaPredicted RBP24.56■■□□□ 1.52
SMARCD1-204ENST00000547637 CLIC2O15247 247 aa24.56■■□□□ 1.52
SMARCD1-204ENST00000547637 STAU1O95793 577 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms