RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZNF840PA6NDX5 716 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 A8MXQ7 604 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 PHACTR2O75167 634 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 VNN1O95497 513 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 EGFP01133 1207 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 CKMP06732 381 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 ATICP31939 592 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 GJA4P35212 333 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 PSMD2Q13200 908 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 HEATR6Q6AI08 1181 aaKnown RBP14.23□□□□□ -0.13
CPSF6-204ENST00000547486 SLC9A9Q8IVB4 645 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 FSIP1Q8NA03 581 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 SH3RF2Q8TEC5 729 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 TMEM174Q8WUU8 243 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 OSCP1Q8WVF1 389 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 EZH1Q92800 747 aaPredicted RBP14.23□□□□□ -0.13
CPSF6-204ENST00000547486 CEP295NLQ96MC4 621 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 TTLL2Q9BWV7 592 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 RNF38Q9H0F5 515 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 SDCBP2Q9H190 292 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 SMYD3Q9H7B4 428 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 ECT2Q9H8V3 914 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 PARD6AQ9NPB6 346 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 EXOC1Q9NV70 894 aa14.23□□□□□ -0.13
CPSF6-204ENST00000547486 TRIM66O15016 1216 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 ANXA13P27216 316 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 RAP1GAPP47736 663 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 NDUFA8P51970 172 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 NOP14P78316 857 aaKnown RBP14.22□□□□□ -0.13
CPSF6-204ENST00000547486 GRSF1Q12849 480 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPSF6-204ENST00000547486 USP4Q13107 963 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 BIRC3Q13489 604 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 NCOA4Q13772 614 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 EML3Q32P44 896 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 C1orf220Q5T0J3 134 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 ERMP1Q7Z2K6 904 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 LONP2Q86WA8 852 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 B3GALNT2Q8NCR0 500 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 GOLGA5Q8TBA6 731 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 SYAP1Q96A49 352 aaPredicted RBP14.22□□□□□ -0.13
CPSF6-204ENST00000547486 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 KCNK16Q96T55 309 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 VRTNQ9H8Y1 702 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 DLL3Q9NYJ7 618 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 TRPM5Q9NZQ8 1165 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 ARHGAP26Q9UNA1 814 aa14.22□□□□□ -0.13
CPSF6-204ENST00000547486 DNAH14Q0VDD8 3507 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 FAM237AA0A1B0GTK4 181 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 PDXKO00764 312 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 NR3C1P04150 777 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 RPN1P04843 607 aaKnown RBP14.21□□□□□ -0.13
CPSF6-204ENST00000547486 TCF3P15923 654 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 HOXA6P31267 233 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 PXNP49023 591 aaPredicted RBP14.21□□□□□ -0.13
CPSF6-204ENST00000547486 FOXK2Q01167 660 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 TAF10Q12962 218 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 SIM2Q14190 667 aaPredicted RBP14.21□□□□□ -0.13
CPSF6-204ENST00000547486 KCNB1Q14721 858 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 RSPO4Q2I0M5 234 aaPredicted RBP14.21□□□□□ -0.13
CPSF6-204ENST00000547486 PRR23BQ6ZRT6 265 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 P2RY13Q9BPV8 354 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 USP25Q9UHP3 1055 aa14.21□□□□□ -0.13
CPSF6-204ENST00000547486 ANTXRLA6NF34 631 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 LEFTY2O00292 366 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 RNF40O75150 1001 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 OLFM2O95897 454 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 ABL1P00519 1130 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 SYKP43405 635 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 IFNAR2P48551 515 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 AP3M2P53677 418 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 KRT85P78386 507 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 AMPD2Q01433 879 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 SPEM2Q0P670 501 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 ZNF699Q32M78 642 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 ZACNQ401N2 412 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 ZNF667Q5HYK9 610 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 SCARA5Q6ZMJ2 495 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 CPA6Q8N4T0 437 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 SECISBP2LQ93073 1101 aaKnown RBP14.2□□□□□ -0.14
CPSF6-204ENST00000547486 ATP2A3Q93084 1043 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 ELOVL4Q9GZR5 314 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 GOLPH3LQ9H4A5 285 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 MAPK8IP1Q9UQF2 711 aa14.2□□□□□ -0.14
CPSF6-204ENST00000547486 DENND4CQ5VZ89 1909 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 OBSL1O75147 1896 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 KIF26AQ9ULI4 1882 aaPredicted RBP14.19□□□□□ -0.14
CPSF6-204ENST00000547486 TNFRSF10BO14763 440 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 SCAMP3O14828 347 aaKnown RBP14.19□□□□□ -0.14
CPSF6-204ENST00000547486 OAS1P00973 400 aaKnown RBP14.19□□□□□ -0.14
CPSF6-204ENST00000547486 MYL1P05976 194 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 PFKLP17858 780 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 DRD1P21728 446 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 CNR2P34972 360 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 PPP3CCP48454 512 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 SLC7A9P82251 487 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 DPYDQ12882 1025 aa14.19□□□□□ -0.14
CPSF6-204ENST00000547486 IFRD2Q12894 506 aaPredicted RBP14.19□□□□□ -0.14
CPSF6-204ENST00000547486 ORC1Q13415 861 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms