RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 PSMD5Q16401 504 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 PPP1R2P3Q6NXS1 205 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 NT5DC3Q86UY8 548 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 CEP57Q86XR8 500 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 PALB2Q86YC2 1186 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 SLC35G2Q8TBE7 412 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 AENQ8WTP8 325 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 MYH10P35580 1976 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 PGRMC1O00264 195 aaKnown RBP18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 KCNK3O14649 394 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 PPEF2O14830 753 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 RFPL2O75678 378 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 GLUD1P00367 558 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 NFICP08651 508 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 LRPAP1P30533 357 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 CXCR5P32302 372 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 RPL9P32969 192 aaKnown RBP18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 AP3M2P53677 418 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 GPC5P78333 572 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 ELAVL2Q12926 359 aaKnown RBP18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 PSMD6Q15008 389 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 GPR149Q86SP6 731 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 DAAM2Q86T65 1068 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 ZNF677Q86XU0 584 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 CBWD2Q8IUF1 395 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 PLEKHO2Q8TD55 490 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 CAVIN3Q969G5 261 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 ZNF707Q96C28 371 aaPredicted RBP18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 KIF12Q96FN5 646 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 SFXN1Q9H9B4 322 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 GDF3Q9NR23 364 aa18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 AGO2Q9UKV8 859 aaKnown RBP18.29■□□□□ 0.52
RBFOX1-207ENST00000547338 LRRIQ3A6PVS8 624 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 TBC1D4O60343 1298 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 C1RP00736 705 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 KYAT1Q16773 422 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 ALS2CLQ60I27 953 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 JADE1Q6IE81 842 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 C11orf63Q6NUN7 778 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 RNF135Q8IUD6 432 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 POP1Q99575 1024 aaKnown RBP18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 CARD9Q9H257 536 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 RPF1Q9H9Y2 349 aaKnown RBP18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 RBM12Q9NTZ6 932 aaKnown RBP18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 MTRRQ9UBK8 725 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 DOCK6Q96HP0 2047 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 CYP3A5P20815 502 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 SP100P23497 879 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 C15orf39Q6ZRI6 1047 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 GPIHBP1Q8IV16 184 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 ARHGEF19Q8IW93 802 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 GOLGA6L1Q8N7Z2 621 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 CMASQ8NFW8 434 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 EXOC4Q96A65 974 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 SUSD3Q96L08 255 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 SLITRK6Q9H5Y7 841 aa18.28■□□□□ 0.52
RBFOX1-207ENST00000547338 CREMQ03060 361 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 MRPL58Q14197 206 aaKnown RBP18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 WDR44Q5JSH3 913 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 CES5AQ6NT32 575 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 SV2AQ7L0J3 742 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 EFCAB13Q8IY85 973 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 CCDC26Q8TAB7 109 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 SAAL1Q96ER3 474 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 PDE11AQ9HCR9 933 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 MUTYHQ9UIF7 546 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 FBXW11Q9UKB1 542 aa18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 UBQLN1Q9UMX0 589 aaKnown RBP18.27■□□□□ 0.51
RBFOX1-207ENST00000547338 SCN1AP35498 2009 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 GOLGA8IPA6NC78 632 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 GOLGA8JA6NMD2 632 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 TMCO5BA8MYB1 307 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 FTLP02792 175 aaPredicted RBP18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 OR1D2P34982 312 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 MTHFRP42898 656 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 CDR2Q01850 454 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 CUL1Q13616 776 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 RAB33AQ14088 237 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 SURF1Q15526 300 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 VARS2Q5ST30 1063 aaKnown RBP18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 SCARA3Q6AZY7 606 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 MAATS1Q7Z4T9 603 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 PPM1KQ8N3J5 372 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 KREMEN2Q8NCW0 462 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 EPS8L1Q8TE68 723 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 WHAMMQ8TF30 809 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 HDAC7Q8WUI4 952 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 FAM84AQ96KN4 292 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 NECTIN4Q96NY8 510 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 FNBP1Q96RU3 617 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 UVRAGQ9P2Y5 699 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 NOCTQ9UK39 431 aaKnown RBP18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 HPCAL4Q9UM19 191 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 BACE2Q9Y5Z0 518 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 TSC2P49815 1807 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 TECTAO75443 2155 aa18.26■□□□□ 0.51
RBFOX1-207ENST00000547338 C2CD4DB7Z1M9 353 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 SPTLC1O15269 473 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 TRAPPC3O43617 180 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms