RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ITIH2P19823 946 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 GPD2P43304 727 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 MAGEA4P43358 317 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 TRIM32Q13049 653 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 SRLQ86TD4 932 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 TTC30AQ86WT1 665 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 FAM131BQ86XD5 332 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 SLC2A14Q8TDB8 520 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 FAM172AQ8WUF8 416 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 CABS1Q96KC9 395 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 EPN3Q9H201 632 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 SLC5A4Q9NY91 659 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 STRIP2Q9ULQ0 834 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 hCG_1818297A0A087WSY0 165 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 CASTOR2A6NHX0 329 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 AUHQ13825 339 aaKnown RBP13.34□□□□□ -0.27
SCAF11-209ENST00000547018 GRB14Q14449 540 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 CA9Q16790 459 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 NOTUMQ6P988 496 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 SLC27A1Q6PCB7 646 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 OTUD6BQ8N6M0 293 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 SEC14L1Q92503 715 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 KAT2BQ92831 832 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 PEBP4Q96S96 227 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 SEPT10Q9P0V9 454 aa13.34□□□□□ -0.27
SCAF11-209ENST00000547018 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCAF11-209ENST00000547018 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 SIGLEC16A6NMB1 481 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 SPTLC1O15269 473 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 IVDP26440 423 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.27
SCAF11-209ENST00000547018 CDKN2BP42772 138 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 CTCFP49711 727 aaPredicted RBP13.33□□□□□ -0.27
SCAF11-209ENST00000547018 SOX4Q06945 474 aaPredicted RBP13.33□□□□□ -0.27
SCAF11-209ENST00000547018 BEST2Q8NFU1 509 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 GAD1Q99259 594 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 OSBPL7Q9BZF2 842 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 ASB7Q9H672 318 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.33□□□□□ -0.27
SCAF11-209ENST00000547018 PCDH10Q9P2E7 1040 aa13.33□□□□□ -0.27
SCAF11-209ENST00000547018 GOLGA6L7A0A1B0GV03 622 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 TMEM120BA0PK00 339 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 GMNCA6NCL1 334 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 LSM8O95777 96 aaKnown RBP13.33□□□□□ -0.28
SCAF11-209ENST00000547018 BRAFP15056 766 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 KDELR1P24390 212 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 PSEN2P49810 448 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 KLF1Q13351 362 aaPredicted RBP13.33□□□□□ -0.28
SCAF11-209ENST00000547018 EFTUD2Q15029 972 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCAF11-209ENST00000547018 SNX17Q15036 470 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 TRNP1Q6NT89 227 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 TRIM56Q9BRZ2 755 aaKnown RBP13.33□□□□□ -0.28
SCAF11-209ENST00000547018 KATNBL1Q9H079 304 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 CHMP2BQ9UQN3 213 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 TP73O15350 636 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 TTC4O95801 387 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 VDRP11473 427 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 SDC4P31431 198 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 MAP2K5Q13163 448 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 CYP1B1Q16678 543 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 IQSEC1Q6DN90 963 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
SCAF11-209ENST00000547018 RASA4BC9J798 803 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 RASA4O43374 803 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 CREB3O43889 395 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 FGFR1P11362 822 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 GPD1P21695 349 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 YY1P25490 414 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 NDUFV1P49821 464 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 EIF3BP55884 814 aaKnown RBP13.32□□□□□ -0.28
SCAF11-209ENST00000547018 FSCN1Q16658 493 aaKnown RBP13.32□□□□□ -0.28
SCAF11-209ENST00000547018 C6orf118Q5T5N4 469 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 CD302Q8IX05 232 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 CTAGE3PQ8IX95 158 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 PYROXD2Q8N2H3 581 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 UBR7Q8N806 425 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 P3H4Q92791 437 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 CNTN6Q9UQ52 1028 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 NOD1Q9Y239 953 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 NME7Q9Y5B8 376 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 MGAMO43451 1857 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 MCF2LO15068 1137 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 KCNN4O15554 427 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 POMCP01189 267 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 HMGCRP04035 888 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 NEFHP12036 1026 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 ELNP15502 786 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 MLH1P40692 756 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 PTK6Q13882 451 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 SOWAHAQ2M3V2 549 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 DCAF6Q58WW2 860 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 ANKRD23Q86SG2 305 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 EXOC3L1Q86VI1 746 aa13.32□□□□□ -0.28
SCAF11-209ENST00000547018 DARSP14868 501 aaKnown RBP13.31□□□□□ -0.28
SCAF11-209ENST00000547018 VCPP55072 806 aaKnown RBP13.31□□□□□ -0.28
SCAF11-209ENST00000547018 YWHAGP61981 247 aaKnown RBP eCLIP13.31□□□□□ -0.28
SCAF11-209ENST00000547018 PITX1P78337 314 aaPredicted RBP13.31□□□□□ -0.28
SCAF11-209ENST00000547018 SKOR1P84550 965 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms