RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 WDR5BQ86VZ2 330 aa19.99■□□□□ 0.79
CHPT1-202ENST00000546490 ARL14EPQ8N8R7 260 aaPredicted RBP19.99■□□□□ 0.79
CHPT1-202ENST00000546490 SYAP1Q96A49 352 aaPredicted RBP19.99■□□□□ 0.79
CHPT1-202ENST00000546490 CYP2S1Q96SQ9 504 aa19.99■□□□□ 0.79
CHPT1-202ENST00000546490 ELOVL4Q9GZR5 314 aa19.99■□□□□ 0.79
CHPT1-202ENST00000546490 ECT2Q9H8V3 914 aa19.99■□□□□ 0.79
CHPT1-202ENST00000546490 PARD6AQ9NPB6 346 aa19.99■□□□□ 0.79
CHPT1-202ENST00000546490 TRPM5Q9NZQ8 1165 aa19.99■□□□□ 0.79
CHPT1-202ENST00000546490 GCNT4Q9P109 453 aa19.99■□□□□ 0.79
CHPT1-202ENST00000546490 HRO43593 1189 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 CLSTN1O94985 981 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 TCF3P15923 654 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 ATICP31939 592 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 GJA4P35212 333 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 SPEM2Q0P670 501 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 SRSF5Q13243 272 aaKnown RBP19.98■□□□□ 0.79
CHPT1-202ENST00000546490 CEP68Q76N32 757 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 SH3RF2Q8TEC5 729 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 P2RY13Q9BPV8 354 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 TTLL2Q9BWV7 592 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 EXOC1Q9NV70 894 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 ARHGAP26Q9UNA1 814 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 SLC8A2Q9UPR5 921 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 WNT6Q9Y6F9 365 aa19.98■□□□□ 0.79
CHPT1-202ENST00000546490 F8VP50 259 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 RNF40O75150 1001 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 PHACTR2O75167 634 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 EGFP01133 1207 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 HDCP19113 662 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 TGM1P22735 817 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 PPP3CCP48454 512 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 MYL6P60660 151 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 USP46P62068 366 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 NOP14P78316 857 aaKnown RBP19.97■□□□□ 0.79
CHPT1-202ENST00000546490 DNM1Q05193 864 aaKnown RBP19.97■□□□□ 0.79
CHPT1-202ENST00000546490 BIRC3Q13489 604 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 PKP1Q13835 747 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 EML3Q32P44 896 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 FBXO43Q4G163 708 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 PKN3Q6P5Z2 889 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 GRAMD1CQ8IYS0 662 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 C8orf48Q96LL4 319 aa19.97■□□□□ 0.79
CHPT1-202ENST00000546490 GZF1Q9H116 711 aaPredicted RBP19.97■□□□□ 0.79
CHPT1-202ENST00000546490 NXF1Q9UBU9 619 aaKnown RBP19.97■□□□□ 0.79
CHPT1-202ENST00000546490 CCDC163A0A0D9SF12 145 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 MED19A0JLT2 244 aaPredicted RBP19.96■□□□□ 0.79
CHPT1-202ENST00000546490 A8MXQ7 604 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 NFATC1O95644 943 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 SLFN14P0C7P3 912 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 PTPN1P18031 435 aaKnown RBP19.96■□□□□ 0.79
CHPT1-202ENST00000546490 AP3M2P53677 418 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 NR1H3Q13133 447 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 ZNF699Q32M78 642 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 B3GALNT2Q8NCR0 500 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 ZNF516Q92618 1163 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 CD101Q93033 1021 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 XYLT2Q9H1B5 865 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 DPEP3Q9H4B8 488 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 SERTAD1Q9UHV2 236 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 NME7Q9Y5B8 376 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 ATP8B3O60423 1300 aa19.96■□□□□ 0.79
CHPT1-202ENST00000546490 ACTN4O43707 911 aaKnown RBP19.95■□□□□ 0.78
CHPT1-202ENST00000546490 CASP4P49662 377 aa19.95■□□□□ 0.78
CHPT1-202ENST00000546490 SLITRK1Q96PX8 696 aa19.95■□□□□ 0.78
CHPT1-202ENST00000546490 ZNF518BQ9C0D4 1074 aa19.95■□□□□ 0.78
CHPT1-202ENST00000546490 VRTNQ9H8Y1 702 aa19.95■□□□□ 0.78
CHPT1-202ENST00000546490 RCOR1Q9UKL0 485 aa19.95■□□□□ 0.78
CHPT1-202ENST00000546490 LRRIQ3A6PVS8 624 aaPredicted RBP19.94■□□□□ 0.78
CHPT1-202ENST00000546490 KLRC4O43908 158 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 GALK1P51570 392 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 PSMD2Q13200 908 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 ZNF667Q5HYK9 610 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 TDRD10Q5VZ19 366 aaKnown RBP19.94■□□□□ 0.78
CHPT1-202ENST00000546490 FAM160A2Q8N612 972 aaPredicted RBP19.94■□□□□ 0.78
CHPT1-202ENST00000546490 SPRYD3Q8NCJ5 442 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 KIAA0895Q8NCT3 520 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 GAB3Q8WWW8 586 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 ACDQ96AP0 544 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 RTKNQ9BST9 563 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 SMYD3Q9H7B4 428 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 FBRSL1Q9HCM7 1045 aaKnown RBP19.94■□□□□ 0.78
CHPT1-202ENST00000546490 SEMA4GQ9NTN9 838 aa19.94■□□□□ 0.78
CHPT1-202ENST00000546490 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.94■□□□□ 0.78
CHPT1-202ENST00000546490 ZNF840PA6NDX5 716 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 LEFTY2O00292 366 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 FOXD2O60548 495 aaPredicted RBP19.93■□□□□ 0.78
CHPT1-202ENST00000546490 RPP40O75818 363 aaKnown RBP19.93■□□□□ 0.78
CHPT1-202ENST00000546490 MYL1P05976 194 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 CCDC192P0DO97 292 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 PFKFB1P16118 471 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 HOXC13P31276 330 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 PXNP49023 591 aaPredicted RBP19.93■□□□□ 0.78
CHPT1-202ENST00000546490 ATXN1P54253 815 aaKnown RBP19.93■□□□□ 0.78
CHPT1-202ENST00000546490 CACNA2D1P54289 1103 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 SLC7A9P82251 487 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 IFRD2Q12894 506 aaPredicted RBP19.93■□□□□ 0.78
CHPT1-202ENST00000546490 STK4Q13043 487 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 NCOA4Q13772 614 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 CSRP2Q16527 193 aa19.93■□□□□ 0.78
CHPT1-202ENST00000546490 KMT5BQ4FZB7 885 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms