RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 NT5C1B-RDH14C9J2C7 533 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 PIRO00625 290 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 MED7O43513 233 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 IGHA2P01877 340 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 MYBL1P10243 752 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 VDRP11473 427 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 CTNNA2P26232 953 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 GDF10P55107 478 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 LPIN1Q14693 890 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 CNGA2Q16280 664 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 GPR152Q8TDT2 470 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 FAM81BQ96LP2 452 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 RUFY1Q96T51 708 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 SRRDQ9UH36 339 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 MTUS1Q9ULD2 1270 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 PRG3Q9Y2Y8 225 aaPredicted RBP12.58□□□□□ -0.4
CCDC38-202ENST00000546386 MFHAS1Q9Y4C4 1052 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 TRIM17Q9Y577 477 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 HEY1Q9Y5J3 304 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 TRIOO75962 3097 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 CCDC188H7C350 402 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 CST8O60676 142 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 MBTPS1Q14703 1052 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
CCDC38-202ENST00000546386 SDHAF4Q5VUM1 108 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 HFE2Q6ZVN8 426 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 ZNF280BQ86YH2 543 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 CALR3Q96L12 384 aaKnown RBP12.57□□□□□ -0.4
CCDC38-202ENST00000546386 SLITRK1Q96PX8 696 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 FMO2Q99518 471 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 DDX43Q9NXZ2 648 aaKnown RBP12.57□□□□□ -0.4
CCDC38-202ENST00000546386 GRHL1Q9NZI5 618 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 PCDHGC3Q9UN70 934 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 TRPV2Q9Y5S1 764 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 HSF2BPO75031 334 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 ECEL1O95672 775 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 THP07101 528 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 PECAM1P16284 738 aaPredicted RBP12.57□□□□□ -0.4
CCDC38-202ENST00000546386 ATICP31939 592 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 TAF6P49848 677 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 ADIGQ0VDE8 80 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 NME3Q13232 169 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 CCDC38Q502W7 563 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 DUPD1Q68J44 220 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 TAF2Q6P1X5 1199 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 ZDHHC24Q6UX98 284 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 DSTYKQ6XUX3 929 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 GPRIN1Q7Z2K8 1008 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 GOLGA6L1Q8N7Z2 621 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 TRIM11Q96F44 468 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 HESX1Q9UBX0 185 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 PTCH2Q9Y6C5 1203 aa12.57□□□□□ -0.4
CCDC38-202ENST00000546386 SIGLEC16A6NMB1 481 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 PQBP1O60828 265 aaKnown RBP12.56□□□□□ -0.4
CCDC38-202ENST00000546386 TIGD5Q53EQ6 642 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 RTN4RL1Q86UN2 441 aaPredicted RBP12.56□□□□□ -0.4
CCDC38-202ENST00000546386 FAM131BQ86XD5 332 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 EDEM1Q92611 657 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 SCLYQ96I15 445 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 SENP8Q96LD8 212 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
CCDC38-202ENST00000546386 CEP41Q9BYV8 373 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 SGK1O00141 431 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 CES2O00748 559 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 FSCN2O14926 492 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 LSM8O95777 96 aaKnown RBP12.56□□□□□ -0.4
CCDC38-202ENST00000546386 PAEPP09466 180 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 MCM3P25205 808 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 CDH6P55285 790 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 TUBB4BP68371 445 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 INCA1Q0VD86 236 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 SLC29A2Q14542 456 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 CCDC14Q49A88 953 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 LCLAT1Q6UWP7 414 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 SPOCD1Q6ZMY3 1216 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 CEP57Q86XR8 500 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 FAM172AQ8WUF8 416 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 C9orf72Q96LT7 481 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 DCLK3Q9C098 648 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 ZNF518BQ9C0D4 1074 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 SLITRK6Q9H5Y7 841 aa12.56□□□□□ -0.4
CCDC38-202ENST00000546386 PIH1D1Q9NWS0 290 aaKnown RBP12.56□□□□□ -0.4
CCDC38-202ENST00000546386 DDX20Q9UHI6 824 aaKnown RBP12.56□□□□□ -0.4
CCDC38-202ENST00000546386 PODXLO00592 558 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 TP73O15350 636 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 UPP2O95045 317 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 AMHP03971 560 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 ITGA8P53708 1063 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 CCL23P55773 120 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 SLC25A11Q02978 314 aaKnown RBP12.55□□□□□ -0.4
CCDC38-202ENST00000546386 ENPEPQ07075 957 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 FAXCQ5TGI0 409 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 SYPL2Q5VXT5 272 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 EMBQ6PCB8 327 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 TMC3Q7Z5M5 1100 aa12.55□□□□□ -0.4
CCDC38-202ENST00000546386 RSPH3Q86UC2 560 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms