RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 PCGF5Q86SE9 256 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 XYLT1Q86Y38 959 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 PDIK1LQ8N165 341 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 AGGF1Q8N302 714 aaeCLIP16.54■□□□□ 0.24
LDLR-204ENST00000545707 SPATA18Q8TC71 538 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 NLRP4Q96MN2 994 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 ASCC2Q9H1I8 757 aaPredicted RBP16.54■□□□□ 0.24
LDLR-204ENST00000545707 ATP5HO75947 161 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 CXCL8P10145 99 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 RAD23BP54727 409 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 KBTBD12Q3ZCT8 623 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 CLNKQ7Z7G1 428 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 PPP1R16BQ96T49 567 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 DHRS4Q9BTZ2 278 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 SMYD3Q9H7B4 428 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 MANSC1Q9H8J5 431 aa16.54■□□□□ 0.24
LDLR-204ENST00000545707 CFAP69A5D8W1 941 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 INO80B-WBP1J3KQ70 363 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 GRAP2O75791 330 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 POLR2BP30876 1174 aaKnown RBP16.53■□□□□ 0.24
LDLR-204ENST00000545707 AP3M2P53677 418 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 CRYMQ14894 314 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 FYB2Q5VWT5 728 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 RFWD3Q6PCD5 774 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 UBA3Q8TBC4 463 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 TTC17Q96AE7 1141 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 FAM111AQ96PZ2 611 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 NUDCD1Q96RS6 583 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 PEBP4Q96S96 227 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 INO80BQ9C086 356 aaPredicted RBP16.53■□□□□ 0.24
LDLR-204ENST00000545707 DENND2DQ9H6A0 471 aaPredicted RBP16.53■□□□□ 0.24
LDLR-204ENST00000545707 FBXO6Q9NRD1 293 aaPredicted RBP16.53■□□□□ 0.24
LDLR-204ENST00000545707 HOXC10Q9NYD6 342 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 HEY2Q9UBP5 337 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 STRIP2Q9ULQ0 834 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 PARP14Q460N5 1801 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 SOWAHBA6NEL2 793 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 KBTBD13C9JR72 458 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 C2CD2LO14523 706 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 UPP2O95045 317 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 MT-ND3P03897 115 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 CDO1Q16878 200 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 CTC1Q2NKJ3 1217 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 HSDL1Q3SXM5 330 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 FAXCQ5TGI0 409 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 TRIM68Q6AZZ1 485 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 DARS2Q6PI48 645 aaKnown RBP16.53■□□□□ 0.24
LDLR-204ENST00000545707 C1orf228Q6PIY5 440 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 PRPF39Q86UA1 669 aaKnown RBP16.53■□□□□ 0.24
LDLR-204ENST00000545707 MAB21L3Q8N8X9 362 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 KCNN1Q92952 543 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 PIWIL1Q96J94 861 aaKnown RBP16.53■□□□□ 0.24
LDLR-204ENST00000545707 C12orf42Q96LP6 360 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 CAMKK2Q96RR4 588 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 MIPEPQ99797 713 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 MINDY3Q9H8M7 445 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 RNPEPL1Q9HAU8 725 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 DONSONQ9NYP3 566 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 SIX4Q9UIU6 781 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 USP18Q9UMW8 372 aa16.53■□□□□ 0.24
LDLR-204ENST00000545707 TCRBV9S1A1TA0A576 114 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 E7ESA3 106 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 NFKBIEO00221 500 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 LPXNO60711 386 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 ARIH2O95376 493 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 TNNC2P02585 160 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 PYGBP11216 843 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 NEFHP12036 1026 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 EFNA5P52803 228 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 YWHAGP61981 247 aaKnown RBP eCLIP16.52■□□□□ 0.24
LDLR-204ENST00000545707 PTK7Q13308 1070 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 RASA2Q15283 850 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 TAF11Q15544 211 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 C15orf59Q2T9L4 293 aaPredicted RBP16.52■□□□□ 0.24
LDLR-204ENST00000545707 KLHL38Q2WGJ6 581 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 SLC45A4Q5BKX6 768 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 TREML2Q5T2D2 321 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 INPP5DQ92835 1189 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 ARL8BQ9NVJ2 186 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 BTBD7Q9P203 1132 aa16.52■□□□□ 0.24
LDLR-204ENST00000545707 PHIPQ8WWQ0 1821 aa16.52■□□□□ 0.23
LDLR-204ENST00000545707 NFICP08651 508 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 GNAZP19086 355 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 BGNP21810 368 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 CALB2P22676 271 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 TTC13Q8NBP0 860 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 SLC4A11Q8NBS3 891 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 SEPT1Q8WYJ6 367 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 CFAP36Q96G28 342 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 ANKRD36BP1Q96IX9 119 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 ELOVL4Q9GZR5 314 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
LDLR-204ENST00000545707 ZBTB42B2RXF5 422 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 C19orf81C9J6K1 198 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 APOC4-APOC2K7ER74 178 aa16.51■□□□□ 0.23
LDLR-204ENST00000545707 MCF2LO15068 1137 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms