RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NRG4Q8WWG1 115 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 CDHR1Q96JP9 859 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 C7orf26Q96N11 449 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 NR1H4Q96RI1 486 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 PAPOLBQ9NRJ5 636 aaKnown RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 HOMER2Q9NSB8 354 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 MKS1Q9NXB0 559 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 XPO7Q9UIA9 1087 aaKnown RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 EME2A4GXA9 379 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 MAGEA13PA6NCF6 341 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 APOC4-APOC2K7ER74 178 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 FCHO1O14526 889 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 MCF2LO15068 1137 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 PLSCR1O15162 318 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 CST8O60676 142 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 TBX10O75333 385 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 SNUPNO95149 360 aaKnown RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 APOC2P02655 101 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 POLR2BP30876 1174 aaKnown RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 SERPINB4P48594 390 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 SESN3P58005 492 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 GAD2Q05329 585 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 BBS9Q3SYG4 887 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 CWF19L1Q69YN2 538 aaKnown RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 RINLQ6ZS11 566 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 NET1Q7Z628 596 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 TMPRSS6Q8IU80 811 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 WDR49Q8IV35 697 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 BRSK2Q8IWQ3 736 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 SCYL3Q8IZE3 742 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 RAB3IL1Q8TBN0 382 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 CCDC110Q8TBZ0 833 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 ZNF184Q99676 751 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 FAM192AQ9GZU8 254 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 HAPLN2Q9GZV7 340 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 JPH1Q9HDC5 661 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 FBXO6Q9NRD1 293 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 GINM1Q9NU53 330 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 DDX43Q9NXZ2 648 aaKnown RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 DLGAP2Q9P1A6 1054 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 PDP2Q9P2J9 529 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 ZNF180Q9UJW8 692 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 PPME1Q9Y570 386 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 TCRBV9S1A1TA0A576 114 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 I3L4J1 428 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 GOLGA8RI6L899 631 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 LRCH4O75427 683 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 KDELR1P24390 212 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 PSMA2P25787 234 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 PGM1P36871 562 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 GCLCP48506 637 aaPredicted RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 TRMT5Q32P41 509 aaKnown RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 DNAL1Q4LDG9 190 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 TTC39BQ5VTQ0 682 aaPredicted RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 GPAT2Q6NUI2 795 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 SWSAP1Q6NVH7 229 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 SESTD1Q86VW0 696 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 PDCD7Q8N8D1 485 aaKnown RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 SMC1BQ8NDV3 1235 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 FLAD1Q8NFF5 587 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 OR5B17Q8NGF7 314 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 DEPTORQ8TB45 409 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 ACSF2Q96CM8 615 aaPredicted RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 FAM111AQ96PZ2 611 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 IQCGQ9H095 443 aaKnown RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 PORCNQ9H237 461 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 TMEM134Q9H6X4 195 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 ARHGEF4Q9NR80 690 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.14□□□□□ -0.95
TDP1-204ENST00000545686 TEX264Q9Y6I9 313 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 CAPN14A8MX76 684 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 K7ERI5 159 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 CHADO15335 359 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 NR3C2P08235 984 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 WEE2P0C1S8 567 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 MYL2P10916 166 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 GNAT1P11488 350 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 BGNP21810 368 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 KCNA3P22001 575 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 BRD2P25440 801 aaKnown RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 RFC5P40937 340 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 TGFB2P61812 414 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 ACAP1Q15027 740 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 C6orf163Q5TEZ5 329 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 ATG16L1Q676U5 607 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 ABHD15Q6UXT9 468 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 ZC3H18Q86VM9 953 aaKnown RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 SLC26A11Q86WA9 606 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 CCDC60Q8IWA6 550 aaPredicted RBP9.14□□□□□ -0.95
TDP1-204ENST00000545686 MTMR14Q8NCE2 650 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 GATA6Q92908 595 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 TTC17Q96AE7 1141 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 ZBTB10Q96DT7 871 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 SERAC1Q96JX3 654 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 GMLQ99445 158 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 ADAM33Q9BZ11 813 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 WWP1Q9H0M0 922 aa9.14□□□□□ -0.95
TDP1-204ENST00000545686 WDR35Q9P2L0 1181 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms