RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 DPEP3Q9H4B8 488 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 DUS2Q9NX74 493 aaKnown RBP21.18■□□□□ 0.98
CHD4-213ENST00000545584 NME7Q9Y5B8 376 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 ATP8B3O60423 1300 aa21.18■□□□□ 0.98
CHD4-213ENST00000545584 RHOBTB3O94955 611 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 TDGF1P13385 188 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 NOP14P78316 857 aaKnown RBP21.17■□□□□ 0.98
CHD4-213ENST00000545584 CCINQ13939 588 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 SGSM1Q2NKQ1 1148 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 KRBA2Q6ZNG9 492 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 Q6ZS52 159 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 KIAA2013Q8IYS2 634 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 TNIP3Q96KP6 325 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 SLC22A12Q96S37 553 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 TTLL2Q9BWV7 592 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 SMYD3Q9H7B4 428 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 GCNT4Q9P109 453 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 RAB23Q9ULC3 237 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 SMG5Q9UPR3 1016 aaKnown RBP21.17■□□□□ 0.98
CHD4-213ENST00000545584 TRAF3IP3Q9Y228 551 aa21.17■□□□□ 0.98
CHD4-213ENST00000545584 CFAP54Q96N23 3096 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 KIF26AQ9ULI4 1882 aaPredicted RBP21.16■□□□□ 0.98
CHD4-213ENST00000545584 C2orf78A6NCI8 922 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 PRR29P0C7W0 189 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 ARSAP15289 507 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 CDH8P55286 799 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 USP46P62068 366 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 DPYDQ12882 1025 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 ZNF77Q15935 545 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 SCARA5Q6ZMJ2 495 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 SH3RF2Q8TEC5 729 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 OSCP1Q8WVF1 389 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 SLITRK1Q96PX8 696 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 B3GNT5Q9BYG0 378 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 ZNF518BQ9C0D4 1074 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 ARHGAP26Q9UNA1 814 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 PTPRDP23468 1912 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 GREB1Q4ZG55 1949 aa21.16■□□□□ 0.98
CHD4-213ENST00000545584 TRDMT1O14717 391 aaKnown RBP21.15■□□□□ 0.98
CHD4-213ENST00000545584 IKBKBO14920 756 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 ZNF202O95125 648 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 PAPSS2O95340 614 aaPredicted RBP21.15■□□□□ 0.98
CHD4-213ENST00000545584 ABL1P00519 1130 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 RPL13P26373 211 aaKnown RBP21.15■□□□□ 0.98
CHD4-213ENST00000545584 RAP1GAPP47736 663 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 ID4P47928 161 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 DLG4P78352 724 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 USP4Q13107 963 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 NR1H3Q13133 447 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 BECN1Q14457 450 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 ZACNQ401N2 412 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 TMEM196Q5HYL7 178 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 WDR44Q5JSH3 913 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 DCLK2Q8N568 766 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 RIN3Q8TB24 985 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 TAF4BQ92750 862 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 ATP2A3Q93084 1043 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 MED10Q9BTT4 135 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 ECT2Q9H8V3 914 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 OTOGLQ3ZCN5 2332 aa21.15■□□□□ 0.98
CHD4-213ENST00000545584 ANAPC1Q9H1A4 1944 aa21.14■□□□□ 0.98
CHD4-213ENST00000545584 ZNF840PA6NDX5 716 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 OTOL1A6NHN0 477 aaPredicted RBP21.14■□□□□ 0.97
CHD4-213ENST00000545584 CLDN5O00501 218 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 MAPK13O15264 365 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 ATG13O75143 517 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 VNN1O95497 513 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 TCF3P15923 654 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 TRIM21P19474 475 aaKnown RBP21.14■□□□□ 0.97
CHD4-213ENST00000545584 NR2F2P24468 414 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 VAMP7P51809 220 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 IFRD2Q12894 506 aaPredicted RBP21.14■□□□□ 0.97
CHD4-213ENST00000545584 SV2AQ7L0J3 742 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 NUP93Q8N1F7 819 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 GPR161Q8N6U8 529 aaKnown RBP21.14■□□□□ 0.97
CHD4-213ENST00000545584 GMEB2Q9UKD1 530 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 MAPK8IP1Q9UQF2 711 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 WNT6Q9Y6F9 365 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 DMDP11532 3685 aa21.14■□□□□ 0.97
CHD4-213ENST00000545584 RTN3O95197 1032 aaPredicted RBP21.13■□□□□ 0.97
CHD4-213ENST00000545584 KRT13P13646 458 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 DRD1P21728 446 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 YWHAQP27348 245 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 GJA4P35212 333 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 PIK3CAP42336 1068 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 TAF10Q12962 218 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 NFIL3Q16649 462 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 FSTL4Q6MZW2 842 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 INTS8Q75QN2 995 aaKnown RBP21.13■□□□□ 0.97
CHD4-213ENST00000545584 GUF1Q8N442 669 aaKnown RBP21.13■□□□□ 0.97
CHD4-213ENST00000545584 SMARCD1Q96GM5 515 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 P2RY13Q9BPV8 354 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 IMPG2Q9BZV3 1241 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 GOLPH3LQ9H4A5 285 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 GDPD2Q9HCC8 539 aa21.13■□□□□ 0.97
CHD4-213ENST00000545584 GOLGA6L4A6NEF3 574 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 CHURC1-FNTBB4DL54 471 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 CNR2P34972 360 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 FNTBP49356 437 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 GALK1P51570 392 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms