RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 EMC4Q5J8M3 183 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 FAM43BQ6ZT52 329 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-222ENST00000544585 CEP128Q6ZU80 1094 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 CCDC149Q6ZUS6 474 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 CABP7Q86V35 215 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 TICAM2Q86XR7 235 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 TRIM48Q8IWZ4 208 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 RBM12BQ8IXT5 1001 aaKnown RBP6.91□□□□□ -1.3
CPSF7-222ENST00000544585 PPM1NQ8N819 430 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 PARD3BQ8TEW8 1205 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 ANKS1AQ92625 1134 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 ERCC4Q92889 916 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-222ENST00000544585 GJA10Q969M2 543 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-222ENST00000544585 SPATA33Q96N06 139 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 C16orf70Q9BSU1 422 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 FSD1Q9BTV5 496 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 MLXIPQ9HAP2 919 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 NLRC4Q9NPP4 1024 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 KLHL11Q9NVR0 708 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 TTC41PQ6P2S7 1318 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 REV3LO60673 3130 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 TECTAO75443 2155 aa6.91□□□□□ -1.3
CPSF7-222ENST00000544585 FSD2A1L4K1 749 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 FAM90A27PA6NNH2 459 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 GRM6O15303 877 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 ZBED1O96006 694 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 FGAP02671 866 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 MMP1P03956 469 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 ATF7P17544 494 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-222ENST00000544585 TACR1P25103 407 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 HOXC8P31273 242 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 SLC16A1P53985 500 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 AK2P54819 239 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 RRP1P56182 461 aaKnown RBP6.9□□□□□ -1.3
CPSF7-222ENST00000544585 TRAF1Q13077 416 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 BTG3Q14201 252 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-222ENST00000544585 LLGL1Q15334 1064 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 SLC14A2Q15849 920 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 HSDL1Q3SXM5 330 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 MFSD6Q6ZSS7 791 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 TOGARAM2Q6ZUX3 1019 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 STOX1Q6ZVD7 989 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 RASGRP2Q7LDG7 609 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 KCNK18Q7Z418 384 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 RSPH3Q86UC2 560 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 VSIG10LQ86VR7 867 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 PHOSPHO1Q8TCT1 267 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 LINC01599Q8WXQ3 324 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 AUTS2Q8WXX7 1259 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 C1GALT1C1Q96EU7 318 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 ASIC4Q96FT7 647 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 MSLNLQ96KJ4 702 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 G6PC3Q9BUM1 346 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 PHF7Q9BWX1 381 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-222ENST00000544585 SEMA4AQ9H3S1 761 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 POFUT1Q9H488 388 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 PTPRHQ9HD43 1115 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 PLCB1Q9NQ66 1216 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 PXMP2Q9NR77 195 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 HELLSQ9NRZ9 838 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 IMPACTQ9P2X3 320 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 MYOTQ9UBF9 498 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 TAF6LQ9Y6J9 622 aa6.9□□□□□ -1.3
CPSF7-222ENST00000544585 UBA6A0AVT1 1052 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 APOL3O95236 402 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 GGPS1O95749 300 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 IGLV1-40P01703 118 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 C4BPAP04003 597 aaKnown RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 LPLP06858 475 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 ZNF286BP0CG31 522 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SMIM10L2AP0DMW4 78 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SMIM10L2BP0DMW5 78 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 MYCLP12524 364 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 PDCP20941 246 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SERPINB3P29508 390 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 ICAM3P32942 547 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 GATA4P43694 442 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SLC6A11P48066 632 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 NEDD9Q14511 834 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 CDC37Q16543 378 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 PLA2G4EQ3MJ16 856 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 HSF5Q4G112 596 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 GALNT18Q6P9A2 607 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 USP45Q70EL2 814 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SRLQ86TD4 932 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 CD163Q86VB7 1156 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 FAM186BQ8IYM0 893 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 ADGRF4Q8IZF3 695 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SMRP1Q8NCR6 262 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 HIPK4Q8NE63 616 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 ACRBPQ8NEB7 543 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 VPS37AQ8NEZ2 397 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SPPL3Q8TCT6 385 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SEC14L1Q92503 715 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 ZNF689Q96CS4 500 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 RIPOR3Q96MK2 946 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 GBP4Q96PP9 640 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms