RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SMOQ99835 787 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 ZCWPW1Q9H0M4 648 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 ZBBXA8MT70 800 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 CTNNA2P26232 953 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 SLC6A3Q01959 620 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 OGDHQ02218 1023 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 BTG3Q14201 252 aaPredicted RBP32.04■■■□□ 2.72
CCM2-219ENST00000544363 OLFML1Q6UWY5 402 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 SCUBE3Q8IX30 993 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 UBL4BQ8N7F7 174 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 FNIP1Q8TF40 1166 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 ZNF252P-AS1Q0IIN9 211 aa32.03■■■□□ 2.72
CCM2-219ENST00000544363 SPOUT1Q5T280 376 aaKnown RBP32.03■■■□□ 2.72
CCM2-219ENST00000544363 ZNF280DQ6N043 979 aa32.03■■■□□ 2.72
CCM2-219ENST00000544363 DCP1BQ8IZD4 617 aaKnown RBP32.03■■■□□ 2.72
CCM2-219ENST00000544363 CCDC66A2RUB6 948 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 EFEMP2O95967 443 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 LCP1P13796 627 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 CTNNA1P35221 906 aaKnown RBP32.02■■■□□ 2.72
CCM2-219ENST00000544363 CKAP4Q07065 602 aaKnown RBP32.02■■■□□ 2.72
CCM2-219ENST00000544363 PIGHQ14442 188 aaPredicted RBP32.02■■■□□ 2.72
CCM2-219ENST00000544363 CTXN3Q4LDR2 81 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 KCNT2Q6UVM3 1135 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 C4orf50Q6ZRC1 276 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 IGSF21Q96ID5 467 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 PIWIL1Q96J94 861 aaKnown RBP32.02■■■□□ 2.72
CCM2-219ENST00000544363 B3GALT6Q96L58 329 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 UBXN6Q9BZV1 441 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 CSNK1G1Q9HCP0 422 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 RNF14Q9UBS8 474 aa32.02■■■□□ 2.72
CCM2-219ENST00000544363 BDNFP23560 247 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 TMEM240Q5SV17 173 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 PSRC1Q6PGN9 363 aaPredicted RBP32.01■■■□□ 2.72
CCM2-219ENST00000544363 NIPA2Q8N8Q9 360 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 LRRN4CLQ8ND94 238 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 ZMIZ2Q8NF64 920 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 KRT35Q92764 455 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 ZNF558Q96NG5 402 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 YME1L1Q96TA2 773 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 HTATIP2Q9BUP3 242 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 TMEM30AQ9NV96 361 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 TMEM59LQ9UK28 342 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 PCDHA3Q9Y5H8 950 aa32.01■■■□□ 2.72
CCM2-219ENST00000544363 OR6C75A6NL08 312 aa32■■■□□ 2.71
CCM2-219ENST00000544363 SCNN1AP37088 669 aa32■■■□□ 2.71
CCM2-219ENST00000544363 PEX5P50542 639 aa32■■■□□ 2.71
CCM2-219ENST00000544363 CACNA2D1P54289 1103 aa32■■■□□ 2.71
CCM2-219ENST00000544363 EPHB4P54760 987 aa32■■■□□ 2.71
CCM2-219ENST00000544363 SPATA2LQ8IUW3 424 aaPredicted RBP32■■■□□ 2.71
CCM2-219ENST00000544363 EMC1Q8N766 993 aa32■■■□□ 2.71
CCM2-219ENST00000544363 KCNK16Q96T55 309 aa32■■■□□ 2.71
CCM2-219ENST00000544363 TTPALQ9BTX7 342 aa32■■■□□ 2.71
CCM2-219ENST00000544363 RHOBTB2Q9BYZ6 727 aa32■■■□□ 2.71
CCM2-219ENST00000544363 LRRC4Q9HBW1 653 aa32■■■□□ 2.71
CCM2-219ENST00000544363 MRPL42Q9Y6G3 142 aaKnown RBP32■■■□□ 2.71
CCM2-219ENST00000544363 PTPRSQ13332 1948 aa32■■■□□ 2.71
CCM2-219ENST00000544363 OR4Q2P0C623 313 aa32■■■□□ 2.71
CCM2-219ENST00000544363 SLC39A12Q504Y0 691 aa32■■■□□ 2.71
CCM2-219ENST00000544363 RTP2Q5QGT7 225 aa32■■■□□ 2.71
CCM2-219ENST00000544363 TAS1R1Q7RTX1 841 aa32■■■□□ 2.71
CCM2-219ENST00000544363 ALG3Q92685 438 aa32■■■□□ 2.71
CCM2-219ENST00000544363 CARNS1A5YM72 827 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 H7C4K7 107 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 PDE2AO00408 941 aaPredicted RBP31.99■■■□□ 2.71
CCM2-219ENST00000544363 LAG3P18627 525 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 PSMA2P25787 234 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 MARCKSL1P49006 195 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 RNASE9P60153 205 aaKnown RBP31.99■■■□□ 2.71
CCM2-219ENST00000544363 ADIGQ0VDE8 80 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 CCDC181Q5TID7 509 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 KHSRPQ92945 711 aaKnown RBP eCLIP31.99■■■□□ 2.71
CCM2-219ENST00000544363 MS4A14Q96JA4 679 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.99■■■□□ 2.71
CCM2-219ENST00000544363 CARD9Q9H257 536 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 USTQ9Y2C2 406 aa31.99■■■□□ 2.71
CCM2-219ENST00000544363 SYN1P17600 705 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 GTF2F1P35269 517 aaKnown RBP eCLIP31.98■■■□□ 2.711e-8■■■■■ 31.2
CCM2-219ENST00000544363 PAFAH1B1P43034 410 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 NFE2Q16621 373 aaPredicted RBP31.98■■■□□ 2.71
CCM2-219ENST00000544363 CFAP221Q4G0U5 840 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 DCAF12L1Q5VU92 463 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 ANKS3Q6ZW76 656 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 SLC26A9Q7LBE3 791 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 RNF168Q8IYW5 571 aaPredicted RBP31.98■■■□□ 2.71
CCM2-219ENST00000544363 SLC39A11Q8N1S5 342 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 CLEC4CQ8WTT0 213 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 OXCT2Q9BYC2 517 aaPredicted RBP31.98■■■□□ 2.71
CCM2-219ENST00000544363 DMAP1Q9NPF5 467 aaPredicted RBP31.98■■■□□ 2.71
CCM2-219ENST00000544363 NLRC5Q86WI3 1866 aa31.98■■■□□ 2.71
CCM2-219ENST00000544363 CTAGE15A4D2H0 777 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 C2CD4BA6NLJ0 364 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 HHLA1C9JL84 531 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 F8VP50 259 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 CEP104O60308 925 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 TBC1D4O60343 1298 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 GJB5O95377 273 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 CTAGE8P0CG41 777 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 TAF5Q15542 800 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 USP41Q3LFD5 358 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 DAB2IPQ5VWQ8 1189 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms