RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 ATP5OP48047 213 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 EIF3EP60228 445 aaKnown RBP16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 SLC25A11Q02978 314 aaKnown RBP16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 SLC1A5Q15758 541 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 TSHZ1Q6ZSZ6 1077 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 ZMAT2Q96NC0 199 aaKnown RBP16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 CNTN6Q9UQ52 1028 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 FGFR1P11362 822 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 KDELR1P24390 212 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 ERFP50548 548 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 GPX6P59796 221 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 ARHGAP1Q07960 439 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 CGB2Q6NT52 195 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 FAM183BPQ6ZVS7 135 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 MAK16Q9BXY0 300 aaKnown RBP16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 TRABDQ9H4I3 376 aa16.54■□□□□ 0.24
SNRNP70-203ENST00000544278 TGFB3P10600 412 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 MYO1EQ12965 1108 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 OASLQ15646 514 aaKnown RBP16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 PPP1R15BQ5SWA1 713 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 PPP1R26Q5T8A7 1209 aaPredicted RBP16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 FBXO36Q8NEA4 188 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 MAIP1Q8WWC4 291 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 CPT1BQ92523 772 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 TMEM176AQ96HP8 235 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 FAM167AQ96KS9 214 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 NKIRAS1Q9NYS0 192 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 ERAP1Q9NZ08 941 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 USP18Q9UMW8 372 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 SNX3O60493 162 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 PMF1Q6P1K2 205 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 DARS2Q6PI48 645 aaKnown RBP16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 C3orf62Q6ZUJ4 267 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 CFAP36Q96G28 342 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 SERPINB12Q96P63 405 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 NME7Q9Y5B8 376 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 C5orf60A6NFR6 353 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 C2orf71A6NGG8 1288 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 C3orf70A6NLC5 250 aaPredicted RBP16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 HBP1O60381 514 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 FSBPO95073 299 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 RNASELQ05823 741 aaKnown RBP16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 TMEM132DQ14C87 1099 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 GOLGA7BQ2TAP0 167 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 BSPRYQ5W0U4 402 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 TRPM8Q7Z2W7 1104 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 CCDC63Q8NA47 563 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 PYROXD1Q8WU10 500 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.53■□□□□ 0.249e-18■□□□□ 9.9
SNRNP70-203ENST00000544278 DCTN4Q9UJW0 460 aa16.53■□□□□ 0.24
SNRNP70-203ENST00000544278 CLUHO75153 1309 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 IGKV6-21A0A0C4DH24 114 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 E2F8A0AVK6 867 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 H3BRB1 525 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 CDH16O75309 829 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 KRT4P19013 534 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 YWHAEP62258 255 aaKnown RBP16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 MGAT5Q09328 741 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 MOGSQ13724 837 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 HIF1AQ16665 826 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 RNASEH2BQ5TBB1 312 aaKnown RBP16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 DPP9Q86TI2 863 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 ZCCHC9Q8N567 271 aaKnown RBP16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 FBF1Q8TES7 1133 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 SLCO2A1Q92959 643 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 VCPIP1Q96JH7 1222 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 TUT1Q9H6E5 874 aaKnown RBP16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 DPP3Q9NY33 737 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 PDE4DIPQ5VU43 2346 aa16.52■□□□□ 0.24
SNRNP70-203ENST00000544278 SPDYE5A6NIY4 337 aa16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 RNF8O76064 485 aa16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 LCP1P13796 627 aa16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 CCDC130P13994 396 aa16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 GBP1P32455 592 aa16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 PIGHQ14442 188 aaPredicted RBP16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 ANKS4BQ8N8V4 417 aa16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 FAXDC2Q96IV6 333 aa16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 NXF3Q9H4D5 531 aaKnown RBP16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 XPO7Q9UIA9 1087 aaKnown RBP16.52■□□□□ 0.23
SNRNP70-203ENST00000544278 EIF4BP23588 611 aaKnown RBP16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 GPD2P43304 727 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 NUMBP49757 651 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 YWHAGP61981 247 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 ZNF449Q6P9G9 518 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 CTAGE3PQ8IX95 158 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 FUKQ8N0W3 1084 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 SLC10A4Q96EP9 437 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 TMEM237Q96Q45 408 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 LTBP3Q9NS15 1303 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 DYNC1LI2O43237 492 aaPredicted RBP16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 CILPO75339 1184 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 HMGCRP04035 888 aa16.51■□□□□ 0.23
SNRNP70-203ENST00000544278 PROZP22891 400 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms