RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 BRD2P25440 801 aaKnown RBP15.99■□□□□ 0.15
CD9-210ENST00000543916 MAP3K7CLP57077 242 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 USP46P62068 366 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 FANCCQ00597 558 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 GOLGA7BQ2TAP0 167 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 CYP4A22Q5TCH4 519 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 GAREM2Q75VX8 874 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 TTC30AQ86WT1 665 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 TDRD5Q8NAT2 981 aaKnown RBP15.99■□□□□ 0.15
CD9-210ENST00000543916 LEMD2Q8NC56 503 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 SHKBP1Q8TBC3 707 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 TRMT2BQ96GJ1 504 aaKnown RBP15.99■□□□□ 0.15
CD9-210ENST00000543916 CEP295NLQ96MC4 621 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 CD320Q9NPF0 282 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 USTQ9Y2C2 406 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 MRPS23Q9Y3D9 190 aaKnown RBP15.99■□□□□ 0.15
CD9-210ENST00000543916 NR2E1Q9Y466 385 aa15.99■□□□□ 0.15
CD9-210ENST00000543916 ANAPC1Q9H1A4 1944 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 A0A1W2PRU2 124 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 HHLA1C9JL84 531 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 FOXN3O00409 490 aaPredicted RBP15.98■□□□□ 0.15
CD9-210ENST00000543916 ZNF197O14709 1029 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 TNFRSF10BO14763 440 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 RFX1P22670 979 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 GABRR2P28476 465 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 GBP2P32456 591 aaPredicted RBP15.98■□□□□ 0.15
CD9-210ENST00000543916 USP8P40818 1118 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 RAPGEF1Q13905 1077 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 DRAP1Q14919 205 aaPredicted RBP15.98■□□□□ 0.15
CD9-210ENST00000543916 TAF12Q16514 161 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 FILIP1LQ4L180 1135 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 DENND5BQ6ZUT9 1274 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 OTOP3Q7RTS5 596 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 GPRIN1Q7Z2K8 1008 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 TMEM150AQ86TG1 271 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 NPAS3Q8IXF0 933 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 NUP210Q8TEM1 1887 aaPredicted RBP15.98■□□□□ 0.15
CD9-210ENST00000543916 FGF13Q92913 245 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 MYRFLQ96LU7 910 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 PCMTD1Q96MG8 357 aaPredicted RBP15.98■□□□□ 0.15
CD9-210ENST00000543916 UHRF1Q96T88 793 aaPredicted RBP15.98■□□□□ 0.15
CD9-210ENST00000543916 DUSP16Q9BY84 665 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 ACP6Q9NPH0 428 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.98■□□□□ 0.15
CD9-210ENST00000543916 TSPAN16Q9UKR8 245 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 CDH7Q9ULB5 785 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 KIAA1257Q9ULG3 409 aa15.98■□□□□ 0.15
CD9-210ENST00000543916 TADA3O75528 432 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 MICAL2O94851 1124 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 F11P03951 625 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 NPR3P17342 541 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 SSTR3P32745 418 aaPredicted RBP15.97■□□□□ 0.15
CD9-210ENST00000543916 SLC5A3P53794 718 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 POLR2FP61218 127 aaKnown RBP15.97■□□□□ 0.15
CD9-210ENST00000543916 CYP4F8P98187 520 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 NR1I3Q14994 352 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 TEAD2Q15562 447 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 STXBP5Q5T5C0 1151 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 ANKRD52Q8NB46 1076 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 NEK11Q8NG66 645 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 SCAMP5Q8TAC9 235 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 ACSF2Q96CM8 615 aaPredicted RBP15.97■□□□□ 0.15
CD9-210ENST00000543916 TTLL2Q9BWV7 592 aa15.97■□□□□ 0.15
CD9-210ENST00000543916 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.97■□□□□ 0.15
CD9-210ENST00000543916 F8VZ95 297 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 TULP2O00295 520 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 CYP26A1O43174 497 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 FGF19O95750 216 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 LAMP2P13473 410 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 CDC25CP30307 473 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 GNA15P30679 374 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 CLCN1P35523 988 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 IFRD2Q12894 506 aaPredicted RBP15.96■□□□□ 0.15
CD9-210ENST00000543916 CNGA2Q16280 664 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 PKDCCQ504Y2 493 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 LCLAT1Q6UWP7 414 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 FAM71AQ8IYT1 594 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 ZDHHC14Q8IZN3 488 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 NUP93Q8N1F7 819 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 UBA3Q8TBC4 463 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 MCRS1Q96EZ8 462 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 STK33Q9BYT3 514 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 ATXN3LQ9H3M9 355 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 PNPLA8Q9NP80 782 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 NLRC4Q9NPP4 1024 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 EPS15L1Q9UBC2 864 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 UXTQ9UBK9 157 aaPredicted RBP15.96■□□□□ 0.15
CD9-210ENST00000543916 HESX1Q9UBX0 185 aa15.96■□□□□ 0.15
CD9-210ENST00000543916 THAP12O43422 761 aa15.95■□□□□ 0.14
CD9-210ENST00000543916 BCAT1P54687 386 aa15.95■□□□□ 0.14
CD9-210ENST00000543916 UBASH3AP57075 661 aa15.95■□□□□ 0.14
CD9-210ENST00000543916 JAM2P57087 298 aa15.95■□□□□ 0.14
CD9-210ENST00000543916 PDE4CQ08493 712 aa15.95■□□□□ 0.14
CD9-210ENST00000543916 BST2Q10589 180 aaKnown RBP15.95■□□□□ 0.14
CD9-210ENST00000543916 SMYD5Q6GMV2 418 aa15.95■□□□□ 0.14
CD9-210ENST00000543916 GJD3Q8N144 294 aa15.95■□□□□ 0.14
CD9-210ENST00000543916 ST13P5Q8NFI4 369 aaPredicted RBP15.95■□□□□ 0.14
CD9-210ENST00000543916 ZSWIM3Q96MP5 696 aa15.95■□□□□ 0.14
CD9-210ENST00000543916 GCNAQ96QF7 691 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms