RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 LEFTY2O00292 366 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 WARSP23381 471 aaKnown RBP24.16■■□□□ 1.46
CDKN3-207ENST00000543789 OPRD1P41143 372 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 USP46P62068 366 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 C2orf27AQ580R0 203 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 CBWD2Q8IUF1 395 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 MYCBPAPQ8TBZ2 947 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 MMS19Q96T76 1030 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 EDEM2Q9BV94 578 aa24.16■■□□□ 1.46
CDKN3-207ENST00000543789 CNOT1A5YKK6 2376 aaKnown RBP24.15■■□□□ 1.46
CDKN3-207ENST00000543789 ZNF840PA6NDX5 716 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 TRIM66O15016 1216 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 PPP3CCP48454 512 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 SEC13P55735 322 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 SLC39A14Q15043 492 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 WDR49Q8IV35 697 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 KIAA1958Q8N8K9 716 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 PCED1BQ96HM7 432 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 TTLL2Q9BWV7 592 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 KIAA1586Q9HCI6 787 aa24.15■■□□□ 1.46
CDKN3-207ENST00000543789 MORC2Q9Y6X9 1032 aaPredicted RBP24.15■■□□□ 1.46
CDKN3-207ENST00000543789 C4orf47A7E2U8 309 aa24.14■■□□□ 1.45
CDKN3-207ENST00000543789 GNL1P36915 607 aaPredicted RBP24.14■■□□□ 1.45
CDKN3-207ENST00000543789 SLC7A9P82251 487 aa24.14■■□□□ 1.45
CDKN3-207ENST00000543789 PSAPL1Q6NUJ1 521 aa24.14■■□□□ 1.45
CDKN3-207ENST00000543789 ADGRG2Q8IZP9 1017 aa24.14■■□□□ 1.45
CDKN3-207ENST00000543789 RNF38Q9H0F5 515 aa24.14■■□□□ 1.45
CDKN3-207ENST00000543789 SNX25Q9H3E2 840 aa24.14■■□□□ 1.45
CDKN3-207ENST00000543789 HSPBP1Q9NZL4 362 aa24.14■■□□□ 1.45
CDKN3-207ENST00000543789 CHD8Q9HCK8 2581 aa24.14■■□□□ 1.45
CDKN3-207ENST00000543789 SYT1P21579 422 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 NOP14P78316 857 aaKnown RBP24.13■■□□□ 1.45
CDKN3-207ENST00000543789 GAB4Q2WGN9 574 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 DAB2IPQ5VWQ8 1189 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 PMS2CLQ68D20 193 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 ANO7Q6IWH7 933 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 TRAPPC11Q7Z392 1133 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 FILIP1Q7Z7B0 1213 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 RASSF3Q86WH2 238 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 CCDC33Q8N5R6 958 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 PDILTQ8N807 584 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 GLIS3Q8NEA6 775 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 HPS3Q969F9 1004 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 CNOT6LQ96LI5 555 aaKnown RBP24.13■■□□□ 1.45
CDKN3-207ENST00000543789 C8orf48Q96LL4 319 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 USP28Q96RU2 1077 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 TPSD1Q9BZJ3 242 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 LRRC27Q9C0I9 530 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 MMP17Q9ULZ9 603 aa24.13■■□□□ 1.45
CDKN3-207ENST00000543789 TCHHQ07283 1943 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 F8VP50 259 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 SLC9A3R1O14745 358 aaPredicted RBP24.12■■□□□ 1.45
CDKN3-207ENST00000543789 KHNYNO15037 678 aaKnown RBP24.12■■□□□ 1.45
CDKN3-207ENST00000543789 ABL1P00519 1130 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 FAM163BP0C2L3 166 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 MRPS21P82921 87 aaKnown RBP24.12■■□□□ 1.45
CDKN3-207ENST00000543789 CRY1Q16526 586 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 MDH1BQ5I0G3 518 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 HS2ST1Q7LGA3 356 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 MRPL45Q9BRJ2 306 aaKnown RBP24.12■■□□□ 1.45
CDKN3-207ENST00000543789 CPQQ9Y646 472 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 ZFHX4Q86UP3 3567 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 GREB1Q4ZG55 1949 aa24.12■■□□□ 1.45
CDKN3-207ENST00000543789 MAP1BP46821 2468 aaKnown RBP24.11■■□□□ 1.45
CDKN3-207ENST00000543789 ATG2BQ96BY7 2078 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 LNP1A1A4G5 178 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 ANTXRLA6NF34 631 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 TACC1O75410 805 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 CST3P01034 146 aaPredicted RBP24.11■■□□□ 1.45
CDKN3-207ENST00000543789 CYP17A1P05093 508 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 HOXD13P35453 343 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 NOVA1P51513 510 aaKnown RBP24.11■■□□□ 1.45
CDKN3-207ENST00000543789 TAF10Q12962 218 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 DHCR24Q15392 516 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 TDRD10Q5VZ19 366 aaKnown RBP24.11■■□□□ 1.45
CDKN3-207ENST00000543789 RDH13Q8NBN7 331 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 OR6B3Q8NGW1 331 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 TNMDQ9H2S6 317 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 SMPD4Q9NXE4 827 aa24.11■■□□□ 1.45
CDKN3-207ENST00000543789 DENND4CQ5VZ89 1909 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 ALDH1A2O94788 518 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 OLFM2O95897 454 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 DLATP10515 647 aaKnown RBP24.1■■□□□ 1.45
CDKN3-207ENST00000543789 PTPN1P18031 435 aaKnown RBP24.1■■□□□ 1.45
CDKN3-207ENST00000543789 TNNI1P19237 187 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 TTC30AQ86WT1 665 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 MDGA1Q8NFP4 955 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 SLITRK1Q96PX8 696 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 FNBP1Q96RU3 617 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 PNKPQ96T60 521 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 NME7Q9Y5B8 376 aa24.1■■□□□ 1.45
CDKN3-207ENST00000543789 EIF3DO15371 548 aaKnown RBP eCLIP24.09■■□□□ 1.45
CDKN3-207ENST00000543789 OAS1P00973 400 aaKnown RBP24.09■■□□□ 1.45
CDKN3-207ENST00000543789 BCKDHBP21953 392 aa24.09■■□□□ 1.45
CDKN3-207ENST00000543789 SLC6A11P48066 632 aa24.09■■□□□ 1.45
CDKN3-207ENST00000543789 SNRNP35Q16560 246 aaKnown RBP24.09■■□□□ 1.45
CDKN3-207ENST00000543789 RHBDF2Q6PJF5 856 aa24.09■■□□□ 1.45
CDKN3-207ENST00000543789 CYP2U1Q7Z449 544 aa24.09■■□□□ 1.45
CDKN3-207ENST00000543789 ZNF507Q8TCN5 953 aa24.09■■□□□ 1.45
CDKN3-207ENST00000543789 KBTBD4Q9NVX7 518 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms