RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 GPD2P43304 727 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 PLA2G4AP47712 749 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 NRIP1P48552 1158 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 RGS7P49802 495 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 CLCN4P51793 760 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 CCZ1BP86790 482 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 CCZ1P86791 482 aaPredicted RBP12.55□□□□□ -0.4
DDB1-223ENST00000543658 CENPCQ03188 943 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 IFRD2Q12894 506 aaPredicted RBP12.55□□□□□ -0.4
DDB1-223ENST00000543658 PDCLQ13371 301 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 CAMK1Q14012 370 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 C10orf76Q5T2E6 689 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 ACAD10Q6JQN1 1059 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 PAQR9Q6ZVX9 377 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 KIAA1328Q86T90 577 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 TMEM139Q8IV31 216 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 KREMEN2Q8NCW0 462 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 CPA5Q8WXQ8 436 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 PPP1R13BQ96KQ4 1090 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 HSFY1Q96LI6 401 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 EIF3CQ99613 913 aaKnown RBP12.55□□□□□ -0.4
DDB1-223ENST00000543658 SMOQ99835 787 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 C11orf70Q9BRQ4 267 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 PNPLA8Q9NP80 782 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 CYLDQ9NQC7 956 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 EHD2Q9NZN4 543 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 LMCD1Q9NZU5 365 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 FBXW11Q9UKB1 542 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 STRIP2Q9ULQ0 834 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 SLC27A5Q9Y2P5 690 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 YIPF1Q9Y548 306 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 INSL5Q9Y5Q6 135 aa12.55□□□□□ -0.4
DDB1-223ENST00000543658 EPN1Q9Y6I3 576 aaPredicted RBP12.55□□□□□ -0.4
DDB1-223ENST00000543658 MYO7AQ13402 2215 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 FAM170AA1A519 330 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 PER2O15055 1255 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
DDB1-223ENST00000543658 C1RP00736 705 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 C8AP07357 584 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 UNGP13051 313 aaPredicted RBP12.54□□□□□ -0.4
DDB1-223ENST00000543658 LCP1P13796 627 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 IGFBP4P22692 258 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 EPHB3P54753 998 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 DUSP6Q16828 381 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 DDR2Q16832 855 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 PKDCCQ504Y2 493 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 PPM1LQ5SGD2 360 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 RAD9BQ6WBX8 426 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 ADGRD2Q7Z7M1 963 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 ITIH5Q86UX2 942 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 PIGZQ86VD9 579 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 TCEAL8Q8IYN2 117 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 TTC9BQ8N6N2 239 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 SLC30A5Q8TAD4 765 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 SLC7A14Q8TBB6 771 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 STK32AQ8WU08 396 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 CTNNBL1Q8WYA6 563 aaPredicted RBP12.54□□□□□ -0.4
DDB1-223ENST00000543658 ZNF653Q96CK0 615 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 C8orf48Q96LL4 319 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 CEP295NLQ96MC4 621 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
DDB1-223ENST00000543658 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 SYT11Q9BT88 431 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 PLEKHA4Q9H4M7 779 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 MAN1C1Q9NR34 630 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 ADAM22Q9P0K1 906 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 OBSL1O75147 1896 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 DENND4CQ5VZ89 1909 aa12.54□□□□□ -0.4
DDB1-223ENST00000543658 SOAT2O75908 522 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 BEST1O76090 585 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 FBXO21O94952 628 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 SEC24AO95486 1093 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 FTLP02792 175 aaPredicted RBP12.53□□□□□ -0.4
DDB1-223ENST00000543658 H2AFZP0C0S5 128 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 CCDC175P0C221 793 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 SPATA31D3P0C874 917 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 CSH1P0DML2 217 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 CSH2P0DML3 217 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 MYBL1P10243 752 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 ABCB4P21439 1286 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 MAGEA1P43355 309 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 SLC5A3P53794 718 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
DDB1-223ENST00000543658 ADIGQ0VDE8 80 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 TWF1Q12792 350 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 MTF1Q14872 753 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 ASTE1Q2TB18 679 aaPredicted RBP12.53□□□□□ -0.4
DDB1-223ENST00000543658 PTPN20Q4JDL3 420 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 OR6B2Q6IFH4 312 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 PMF1Q6P1K2 205 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 MMS22LQ6ZRQ5 1243 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 SPATA31D4Q6ZUB0 917 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 TOGARAM2Q6ZUX3 1019 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 H2AFVQ71UI9 128 aa12.53□□□□□ -0.4
DDB1-223ENST00000543658 RTL10Q7L3V2 364 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms