RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 PEAR1Q5VY43 1037 aaPredicted RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 CREB3L3Q68CJ9 461 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 PCSK4Q6UW60 755 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SLC36A4Q6YBV0 504 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 APBB1IPQ7Z5R6 666 aaPredicted RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SLC41A1Q8IVJ1 513 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SFTPA1Q8IWL2 248 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 EFCAB13Q8IY85 973 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 IL17RCQ8NAC3 791 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 TSEN2Q8NCE0 465 aaKnown RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 C1orf216Q8TAB5 229 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SPATA18Q8TC71 538 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 OSCP1Q8WVF1 389 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 ATP2A3Q93084 1043 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 NACC1Q96RE7 527 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 EIF2AK1Q9BQI3 630 aaKnown RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 TCHPQ9BT92 498 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 NFKBIZQ9BYH8 718 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SEMA4CQ9C0C4 833 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 C2orf40Q9H1Z8 148 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 RWDD1Q9H446 243 aaPredicted RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 TOPORSQ9NS56 1045 aaPredicted RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 TM7SF3Q9NS93 570 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 EGFL7Q9UHF1 273 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 VAV3Q9UKW4 847 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SRPK3Q9UPE1 567 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 MYO18BQ8IUG5 2567 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 GOLGA4Q13439 2230 aaKnown RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 CCDC196A0A1B0GTZ2 297 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 A0A1W2PQD8 194 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 MYMKA6NI61 221 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 OR6C75A6NL08 312 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 MEI4A8MW99 385 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 BTBD18B2RXH4 712 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 K7ERI5 159 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 ERVH48-1M5A8F1 160 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 KCNK3O14649 394 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 SCAMP3O14828 347 aaKnown RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 CILPO75339 1184 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 LARGE1O95461 756 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 IGHDP01880 384 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 APODP05090 189 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 CKMP06732 381 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 GSPT1P15170 499 aaKnown RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 ATF6P18850 670 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 OPRD1P41143 372 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 IL12RB1P42701 662 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 TUFMP49411 452 aaKnown RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 CSRP3P50461 194 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 CCT2P78371 535 aaKnown RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 MYO1EQ12965 1108 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 ARID5BQ14865 1188 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 FAM187BQ17R55 369 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 PREPLQ4J6C6 727 aaPredicted RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 NT5DC1Q5TFE4 455 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 SDHAF4Q5VUM1 108 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 OVOS1Q6IE37 1185 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 NYAP1Q6ZVC0 841 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 GLRX5Q86SX6 157 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 BLIDQ8IZY5 108 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 BEST2Q8NFU1 509 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 BSNDQ8WZ55 320 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 MRPS31Q92665 395 aaKnown RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 NXPE2Q96DL1 559 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 DRC1Q96MC2 740 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 FAM20AQ96MK3 541 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 CDC6Q99741 560 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 KIFC3Q9BVG8 833 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 C22orf23Q9BZE7 217 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 FAM124BQ9H5Z6 455 aaPredicted RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 KIF9Q9HAQ2 790 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 IL21Q9HBE4 155 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 CPNE5Q9HCH3 593 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 ANKEF1Q9NU02 776 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 TOR4AQ9NXH8 423 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 TUBGCP4Q9UGJ1 667 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 SEPT3Q9UH03 358 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 IL17BQ9UHF5 180 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 PCDHA4Q9UN74 947 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 BTBD3Q9Y2F9 522 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 HEMK1Q9Y5R4 338 aaPredicted RBP5.17□□□□□ -1.58
LIMS1-214ENST00000542845 TSC2P49815 1807 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 CITO14578 2027 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 OBSL1O75147 1896 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 MYLKQ15746 1914 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 PLXND1Q9Y4D7 1925 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 APC2O95996 2303 aa5.17□□□□□ -1.58
LIMS1-214ENST00000542845 HECTD1Q9ULT8 2610 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 COL5A1P20908 1838 aaPredicted RBP5.16□□□□□ -1.58
LIMS1-214ENST00000542845 MYOFQ9NZM1 2061 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 TMEM131Q92545 1883 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 ZNF462Q96JM2 2506 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 IGHV1OR15-9A0A0B4J2B8 117 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 ICMTO60725 284 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 OAZ2O95190 189 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 NFATC1O95644 943 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 CER1O95813 267 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 F11P03951 625 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 USP17L7P0C7H9 530 aa5.16□□□□□ -1.58
LIMS1-214ENST00000542845 C6P13671 934 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms