RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PGM2Q96G03 612 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 ZNF560Q96MR9 790 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 DDX23Q9BUQ8 820 aaKnown RBP14.88□□□□□ -0.03
LDB3-207ENST00000542786 SENP6Q9GZR1 1112 aaPredicted RBP14.88□□□□□ -0.03
LDB3-207ENST00000542786 MIS12Q9H081 205 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 CDC42EP4Q9H3Q1 356 aaKnown RBP14.88□□□□□ -0.03
LDB3-207ENST00000542786 GOLGA2P5Q9HBQ8 144 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 ANAPC5Q9UJX4 755 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 CDY2AQ9Y6F7 541 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 PIK3R2O00459 728 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 LMO2P25791 158 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 PNPLA4P41247 253 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 PSMC4P43686 418 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 HNRNPH2P55795 449 aaKnown RBP14.87□□□□□ -0.03
LDB3-207ENST00000542786 GNGT1P63211 74 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 LMNB2Q03252 620 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 PDE4CQ08493 712 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 MGAT3Q09327 533 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 TRIM32Q13049 653 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 CCDC14Q49A88 953 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 OR6B2Q6IFH4 312 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 FOXR1Q6PIV2 292 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 CXCL17Q6UXB2 119 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 ZNF365Q70YC5 407 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 RPAINQ86UA6 219 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 OSTM1Q86WC4 334 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 C11orf84Q9BUA3 381 aaPredicted RBP14.87□□□□□ -0.03
LDB3-207ENST00000542786 FRMD8P1Q9BZ68 369 aaPredicted RBP14.87□□□□□ -0.03
LDB3-207ENST00000542786 ASNSD1Q9NWL6 643 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 USP18Q9UMW8 372 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 TRPV2Q9Y5S1 764 aa14.87□□□□□ -0.03
LDB3-207ENST00000542786 ADAMTS4O75173 837 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 VPS41P49754 854 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 TAF6P49848 677 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 FCGRTP55899 365 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 SLC6A3Q01959 620 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 GNASQ5JWF2 1037 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 IZUMO3Q5VZ72 239 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 SERINC5Q86VE9 423 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 HOOK3Q86VS8 718 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 SESTD1Q86VW0 696 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 BBOF1Q8ND07 529 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 GSTCDQ8NEC7 633 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 OR6B3Q8NGW1 331 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 ACTL9Q8TC94 416 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 PWWP2AQ96N64 755 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 PCSK1NQ9UHG2 260 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 A6NNZ2 444 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 MEIS3P2A8K0S8 358 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 A8MXQ7 604 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 XPOTO43592 962 aaKnown RBP14.86□□□□□ -0.03
LDB3-207ENST00000542786 PGK1P00558 417 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 CHRNA1P02708 482 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 ZSCAN5DPP0CG00 497 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 CCDC130P13994 396 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 ETS1P14921 441 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 PDGFRAP16234 1089 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 WARSP23381 471 aaKnown RBP14.86□□□□□ -0.03
LDB3-207ENST00000542786 IGFBP6P24592 240 aaPredicted RBP14.86□□□□□ -0.03
LDB3-207ENST00000542786 MDH1P40925 334 aaKnown RBP14.86□□□□□ -0.03
LDB3-207ENST00000542786 LILRA4P59901 499 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 C15orf59Q2T9L4 293 aaPredicted RBP14.86□□□□□ -0.03
LDB3-207ENST00000542786 TUBB8Q3ZCM7 444 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 ZFYVE27Q5T4F4 411 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 MFSD14CQ5VZR4 134 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 LEKR1Q6ZMV7 388 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 ANKRD52Q8NB46 1076 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 HAUS1Q96CS2 278 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 FOXP3Q9BZS1 431 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 ZMYND15Q9H091 742 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 TSPYL1Q9H0U9 437 aa14.86□□□□□ -0.03
LDB3-207ENST00000542786 NOVA2Q9UNW9 492 aaKnown RBP14.86□□□□□ -0.03
LDB3-207ENST00000542786 DNALI1O14645 258 aaPredicted RBP14.85□□□□□ -0.03
LDB3-207ENST00000542786 CST8O60676 142 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 RNF8O76064 485 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 TTC4O95801 387 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 TKTP29401 623 aaKnown RBP14.85□□□□□ -0.03
LDB3-207ENST00000542786 SCNN1AP37088 669 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 FLT3LGP49771 235 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 MAGOHP61326 146 aaKnown RBP14.85□□□□□ -0.03
LDB3-207ENST00000542786 OTUD4Q01804 1114 aaKnown RBP14.85□□□□□ -0.03
LDB3-207ENST00000542786 GUCY1A3Q02108 690 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 IFFO1Q0D2I5 559 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 P3H1Q32P28 736 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 SV2CQ496J9 727 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 TTC19Q6DKK2 380 aaPredicted RBP14.85□□□□□ -0.03
LDB3-207ENST00000542786 CCSAPQ6IQ19 270 aaPredicted RBP14.85□□□□□ -0.03
LDB3-207ENST00000542786 MFSD5Q6N075 450 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 CCDC25Q86WR0 208 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 ZCCHC9Q8N567 271 aaKnown RBP14.85□□□□□ -0.03
LDB3-207ENST00000542786 TOP6BLQ8N6T0 577 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 CCHCR1Q8TD31 782 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 ZFP42Q96MM3 310 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 B3GNT5Q9BYG0 378 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 ADAM33Q9BZ11 813 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 OSBPL7Q9BZF2 842 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 CENPHQ9H3R5 247 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 PCDH9Q9HC56 1237 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 CYLDQ9NQC7 956 aa14.85□□□□□ -0.03
LDB3-207ENST00000542786 NINJ2Q9NZG7 142 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms