RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 LSM8O95777 96 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 PLEKP08567 350 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 HNRNPA1P09651 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 SPATA31D3P0C874 917 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 FAM228BP0C875 321 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 FAM200BP0CF97 657 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 EPCAMP16422 314 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 HMGA1P17096 107 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 HOXB8P17481 243 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ATF6P18850 670 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 MMP8P22894 467 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ADORA2BP29275 332 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ELF1P32519 619 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 LTBRP36941 435 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 EIF4A3P38919 411 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 GRIK1P39086 918 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ACADSBP45954 432 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 NRIP1P48552 1158 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 KIF11P52732 1056 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 BCAT1P54687 386 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 EPHA5P54756 1037 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 GSCP56915 257 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 MAP3K7CLP57077 242 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 NOMO3P69849 1222 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 CENPCQ03188 943 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ARID5AQ03989 594 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC173Q0VFZ6 552 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 BST2Q10589 180 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 PTP4A2Q12974 167 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF268Q14587 947 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 SLC18A3Q16572 532 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 DDR2Q16832 855 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 CLEC16AQ2KHT3 1053 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 TCEAL5Q5H9L2 206 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 C10orf76Q5T2E6 689 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 SNX30Q5VWJ9 437 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 DENND1BQ6P3S1 775 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 SPATA31D4Q6ZUB0 917 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ARCQ7LC44 396 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 DNAJB7Q7Z6W7 309 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 RBM23Q86U06 439 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 PIGZQ86VD9 579 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 PHF13Q86YI8 300 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 GLYCTKQ8IVS8 523 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 NUP93Q8N1F7 819 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 MICALL1Q8N3F8 863 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 TMEM35BQ8NCS4 154 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 VN1R2Q8NFZ6 395 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 SLC20A1Q8WUM9 679 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 CASP10Q92851 521 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 KHSRPQ92945 711 aaKnown RBP eCLIP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 SECISBP2LQ93073 1101 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 PSMG2Q969U7 264 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 PABPC5Q96DU9 382 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 TRMT2BQ96GJ1 504 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 GUCD1Q96NT3 240 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 PGLYRP2Q96PD5 576 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 GAS2L1Q99501 681 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 EIF3CQ99613 913 aaKnown RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 CDX2Q99626 313 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 PRKD2Q9BZL6 878 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 S1PR5Q9H228 398 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 NHEJ1Q9H9Q4 299 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 CYP4F11Q9HBI6 524 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 DMAP1Q9NPF5 467 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 AVENQ9NQS1 362 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 FAM49BQ9NUQ9 324 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ABI2Q9NYB9 513 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 CLEC1BQ9P126 229 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ADAMTS1Q9UHI8 967 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 NAGPAQ9UK23 515 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 EPN1Q9Y6I3 576 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 MYH10P35580 1976 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ATP8B3O60423 1300 aa6.2□□□□□ -1.42
ABCF1-207ENST00000542772 COL4A4P53420 1690 aaPredicted RBP6.2□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF638Q14966 1978 aaKnown RBP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 CCDC195A0A1B0GUA6 201 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 TCRBV5S1A1TA0A578 114 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 SLC38A8A6NNN8 435 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 F8VP50 259 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ZNF263O14978 683 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 RTN3O95197 1032 aaPredicted RBP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 GLP2RO95838 553 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 FTLP02792 175 aaPredicted RBP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 F11P03951 625 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 C8AP07357 584 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ZDHHC11BP0C7U3 371 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 CSH1P0DML2 217 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 CSH2P0DML3 217 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 PTPN2P17706 415 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 GTF2F1P35269 517 aaKnown RBP eCLIP6.19□□□□□ -1.42
ABCF1-207ENST00000542772 SCNN1AP37088 669 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 ALDH1A3P47895 512 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 PPP3CCP48454 512 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 EPHB3P54753 998 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 SLC8A3P57103 927 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 SNX16P57768 344 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 TWF1Q12792 350 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 PLD1Q13393 1074 aa6.19□□□□□ -1.42
ABCF1-207ENST00000542772 TCEAL1Q15170 157 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms