RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SELENOOQ9BVL4 669 aa13.98□□□□□ -0.17
CHFR-221ENST00000542714 ZMYND8Q9ULU4 1186 aaPredicted RBP13.98□□□□□ -0.17
CHFR-221ENST00000542714 GREB1Q4ZG55 1949 aa13.98□□□□□ -0.17
CHFR-221ENST00000542714 PLXNA3P51805 1871 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 ZBBXA8MT70 800 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 PDE2AO00408 941 aaPredicted RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 LINC00271P0C7V0 271 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 TCP1P17987 556 aaKnown RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 CTNNA2P26232 953 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 CXCR5P32302 372 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 MAN1A1P33908 653 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 RFC1P35251 1148 aaPredicted RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 ALDH7A1P49419 539 aaKnown RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 DNA2P51530 1060 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 MAP3K7CLP57077 242 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 HTRA4P83105 476 aaPredicted RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 TAP1Q03518 808 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 ADCY1Q08828 1119 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 ELAVL2Q12926 359 aaKnown RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 BTG3Q14201 252 aaPredicted RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 WHAMMP3Q1A5X7 153 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 FAM102AQ5T9C2 384 aaPredicted RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 DAB2IPQ5VWQ8 1189 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 ZNF280DQ6N043 979 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 PSRC1Q6PGN9 363 aaPredicted RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 RSPO2Q6UXX9 243 aaPredicted RBP13.97□□□□□ -0.17
CHFR-221ENST00000542714 CEP57Q86XR8 500 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 CLEC4CQ8WTT0 213 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 KCTD13Q8WZ19 329 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 HERVK_113Q902F9 699 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 KRT35Q92764 455 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 SMARCD1Q96GM5 515 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 CARD6Q9BX69 1037 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 CSNK1G1Q9HCP0 422 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 TMEM59LQ9UK28 342 aa13.97□□□□□ -0.17
CHFR-221ENST00000542714 MYO1FO00160 1098 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 GJB5O95377 273 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 KRT3P12035 628 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 LCP1P13796 627 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 LAG3P18627 525 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 BDNFP23560 247 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 CTNNA1P35221 906 aaKnown RBP13.96□□□□□ -0.17
CHFR-221ENST00000542714 ACADSBP45954 432 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 TAS2R40P59535 323 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 SLC6A3Q01959 620 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 ADIGQ0VDE8 80 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 TAF5Q15542 800 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 MAPRE1Q15691 268 aaKnown RBP13.96□□□□□ -0.17
CHFR-221ENST00000542714 CTXN3Q4LDR2 81 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 SLC39A12Q504Y0 691 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 RAB41Q5JT25 222 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 DCAF12L1Q5VU92 463 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 DCUN1D2Q6PH85 259 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 PRSS55Q6UWB4 352 aaPredicted RBP13.96□□□□□ -0.17
CHFR-221ENST00000542714 GPRIN1Q7Z2K8 1008 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 CREG2Q8IUH2 290 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 EMC1Q8N766 993 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 NIPA2Q8N8Q9 360 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 ALG3Q92685 438 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 CAPZA3Q96KX2 299 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 ZNF558Q96NG5 402 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 KCNK16Q96T55 309 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 HTATIP2Q9BUP3 242 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 MIS12Q9H081 205 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 EHD2Q9NZN4 543 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 IP6K2Q9UHH9 426 aa13.96□□□□□ -0.17
CHFR-221ENST00000542714 ZNF638Q14966 1978 aaKnown RBP13.95□□□□□ -0.18
CHFR-221ENST00000542714 OR6C75A6NL08 312 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 C2CD4BA6NLJ0 364 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 KCNK3O14649 394 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 SPOPO43791 374 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 SLU7O95391 586 aaKnown RBP13.95□□□□□ -0.18
CHFR-221ENST00000542714 VNN2O95498 520 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 TCF4P15884 667 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 SCNN1AP37088 669 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 SLC1A1P43005 524 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 PEX5P50542 639 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
CHFR-221ENST00000542714 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 ZDHHC17Q8IUH5 632 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 SPATA2LQ8IUW3 424 aaPredicted RBP13.95□□□□□ -0.18
CHFR-221ENST00000542714 SCUBE3Q8IX30 993 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 DCP1BQ8IZD4 617 aaKnown RBP13.95□□□□□ -0.18
CHFR-221ENST00000542714 ARFGAP1Q8N6T3 406 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 MYRIPQ8NFW9 859 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 FNIP1Q8TF40 1166 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 YME1L1Q96TA2 773 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 TTPALQ9BTX7 342 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 HERC2P3Q9BVR0 1158 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 UBXN6Q9BZV1 441 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 CHST7Q9NS84 486 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 SMARCAL1Q9NZC9 954 aa13.95□□□□□ -0.18
CHFR-221ENST00000542714 MIF4GDA9UHW6 222 aaKnown RBP13.94□□□□□ -0.18
CHFR-221ENST00000542714 F8VP50 259 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 H7C4K7 107 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 CES2O00748 559 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 DPYSL4O14531 572 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 ADAM12O43184 909 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 GRAP2O75791 330 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms