RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 TMEM169Q96HH4 297 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 VCPIP1Q96JH7 1222 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CALR3Q96L12 384 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 HEXIM2Q96MH2 286 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ISCUQ9H1K1 167 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PUF60Q9UHX1 559 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PCDHB12Q9Y5F1 795 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PCDHA13Q9Y5I0 950 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MRPL42Q9Y6G3 142 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ANKRD62A6NC57 917 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 OR6C75A6NL08 312 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 BTNL10A8MVZ5 291 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 H7C4K7 107 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ZNF263O14978 683 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PJA2O43164 708 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 LMNAP02545 664 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 MYBL1P10243 752 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 UNGP13051 313 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 BRD2P25440 801 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 MAGEA1P43355 309 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 NOMO3P69849 1222 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 TSPY1Q01534 308 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 SMARCB1Q12824 385 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ADAM15Q13444 863 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 MRPL58Q14197 206 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 INTS6LQ5JSJ4 861 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 CCDC122Q5T0U0 273 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 SPOUT1Q5T280 376 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 TAF3Q5VWG9 929 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ANKS3Q6ZW76 656 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 KIAA1328Q86T90 577 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ACOT1Q86TX2 421 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 COLGALT1Q8NBJ5 622 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 MSANTD4Q8NCY6 345 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ACRBPQ8NEB7 543 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 HASPINQ8TF76 798 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 TFAP2BQ92481 460 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 RABGGTAQ92696 567 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 NOX5Q96PH1 765 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 SYT15Q9BQS2 421 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 DESI2Q9BSY9 194 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PHF7Q9BWX1 381 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PLVAPQ9BX97 442 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 MIS12Q9H081 205 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ACP6Q9NPH0 428 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 CYLDQ9NQC7 956 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 SPG21Q9NZD8 308 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 HESX1Q9UBX0 185 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 REXO2Q9Y3B8 237 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 NME7Q9Y5B8 376 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 NBEAQ8NFP9 2946 aa13.02□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 NAV2Q8IVL1 2488 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 A0A0A6YYK5 440 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ESPNB1AK53 854 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 KRT86O43790 486 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 SOD2P04179 222 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 TUBB4AP04350 444 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 H2AFZP0C0S5 128 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 TMEM253P0C7T8 217 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PTPN1P18031 435 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 LMO2P25791 158 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 NSFP46459 744 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 BCAT1P54687 386 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 SNX16P57768 344 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PLCB3Q01970 1234 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 KIF5AQ12840 1032 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 USP41Q3LFD5 358 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 VARS2Q5ST30 1063 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 FAM171A1Q5VUB5 890 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 FAM171BQ6P995 826 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 H2AFVQ71UI9 128 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 DDX53Q86TM3 631 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PHF13Q86YI8 300 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 DCP1BQ8IZD4 617 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 MYCBPAPQ8TBZ2 947 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 STK32AQ8WU08 396 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PIK3R5Q8WYR1 880 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PCDHB18PQ96TA0 734 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 HNRNPABQ99729 332 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 ZSWIM1Q9BR11 485 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 TTPALQ9BTX7 342 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 HERC2P3Q9BVR0 1158 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 CLEC1BQ9P126 229 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 HCSTQ9UBK5 93 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 TSPAN16Q9UKR8 245 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 STRIP2Q9ULQ0 834 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 SSX2IPQ9Y2D8 614 aa13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 USP15Q9Y4E8 981 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 PTPRDP23468 1912 aa13□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 F8W810 466 aa13□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 I3L4J1 428 aa13□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 MICAL2O94851 1124 aa13□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 IGFBP6P24592 240 aaPredicted RBP13□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 TKTP29401 623 aaKnown RBP13□□□□□ -0.33
CACNA1C-IT3-201ENST00000542680 GSCP56915 257 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms