RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 NPNTQ6UXI9 565 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 IGDCC3Q8IVU1 814 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 FBXO27Q8NI29 283 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 R3HDMLQ9H3Y0 253 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 PPARGC1AQ9UBK2 798 aaKnown RBP16.04■□□□□ 0.16
CNOT9-208ENST00000542068 COL4A5P29400 1685 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 hCG_1818297A0A087WSY0 165 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 TMEM63AO94886 807 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 C4BPAP04003 597 aaKnown RBP16.03■□□□□ 0.16
CNOT9-208ENST00000542068 RPL22P35268 128 aaKnown RBP16.03■□□□□ 0.16
CNOT9-208ENST00000542068 GJC2Q5T442 439 aaPredicted RBP16.03■□□□□ 0.16
CNOT9-208ENST00000542068 ABHD15Q6UXT9 468 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 PPM1NQ8N819 430 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 ATP11CQ8NB49 1132 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 NRG4Q8WWG1 115 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 CPT1BQ92523 772 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 COPS5Q92905 334 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 SERAC1Q96JX3 654 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 TIPINQ9BVW5 301 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 NRBP2Q9NSY0 501 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 STOML1Q9UBI4 398 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 MAGEB2O15479 319 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 CCDC22O60826 627 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 GRAP2O75791 330 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 WFS1O76024 890 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 PHBP35232 272 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 RFC1P35251 1148 aaPredicted RBP16.03■□□□□ 0.16
CNOT9-208ENST00000542068 PTK7Q13308 1070 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 BMPR2Q13873 1038 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 SLC45A4Q5BKX6 768 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
CNOT9-208ENST00000542068 NSL1Q96IY1 281 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 TRIM56Q9BRZ2 755 aaKnown RBP16.03■□□□□ 0.16
CNOT9-208ENST00000542068 DCLRE1BQ9H816 532 aa16.03■□□□□ 0.16
CNOT9-208ENST00000542068 TMEM191CA6NGB0 347 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 A6NHS1 94 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 SPDYE16A6NNV3 312 aaPredicted RBP16.02■□□□□ 0.16
CNOT9-208ENST00000542068 B2RBV5 119 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 C2CD2LO14523 706 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 GSC2O15499 205 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 EDN1P05305 212 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 INHBAP08476 426 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 GARTP22102 1010 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 AMPD1P23109 780 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 ELK3P41970 407 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 CLCN3P51790 818 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 ISLR2Q6UXK2 745 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 SAMD3Q8N6K7 520 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 CFAP61Q8NHU2 1237 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 JOSD2Q8TAC2 188 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 FBXO41Q8TF61 875 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 BTBD10Q9BSF8 475 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 SHCBP1LQ9BZQ2 653 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 ELP3Q9H9T3 547 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 ZNFX1Q9P2E3 1918 aaKnown RBP16.02■□□□□ 0.16
CNOT9-208ENST00000542068 TBX10O75333 385 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.16
CNOT9-208ENST00000542068 PGM1P36871 562 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 KBTBD12Q3ZCT8 623 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.02■□□□□ 0.16
CNOT9-208ENST00000542068 HIPK4Q8NE63 616 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 FBXL18Q96ME1 805 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 WDR83Q9BRX9 315 aaKnown RBP16.02■□□□□ 0.16
CNOT9-208ENST00000542068 NMUR2Q9GZQ4 415 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 ST6GALNAC4Q9H4F1 302 aa16.02■□□□□ 0.16
CNOT9-208ENST00000542068 E5RJQ4 531 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 B4GALT5O43286 388 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 ZWINTO95229 277 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 CAPSQ13938 189 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 ZNF699Q32M78 642 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 WASHC2DQ5SRD0 308 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 PDIK1LQ8N165 341 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 RILPQ96NA2 401 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 ARHGAP28Q9P2N2 729 aa16.02■□□□□ 0.15
CNOT9-208ENST00000542068 GREB1LQ9C091 1923 aaPredicted RBP16.01■□□□□ 0.15
CNOT9-208ENST00000542068 FCHO1O14526 889 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 STAM2O75886 525 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 IL1R2P27930 398 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 VHLP40337 213 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 CDKN2BP42772 138 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 PTP4A2Q12974 167 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 MMRN1Q13201 1228 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 SCYL2Q6P3W7 929 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 C1orf228Q6PIY5 440 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 ZNF677Q86XU0 584 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 KCTD6Q8NC69 237 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 PHC3Q8NDX5 983 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 ACAP3Q96P50 834 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 ZNF408Q9H9D4 720 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 TAS2R1Q9NYW7 299 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 SENP1Q9P0U3 644 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 POLIQ9UNA4 740 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 C2CD2Q9Y426 696 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 CYB561D2O14569 222 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 PMM2O15305 246 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 USP1O94782 785 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 ALDH18A1P54886 795 aaKnown RBP16.01■□□□□ 0.15
CNOT9-208ENST00000542068 OASLQ15646 514 aaKnown RBP16.01■□□□□ 0.15
CNOT9-208ENST00000542068 HSDL1Q3SXM5 330 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 ZCCHC23Q6ZST2 131 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms