RNA–Protein interactions for RNA: ENST00000541473.1

TMEM216-204, Transcript of transmembrane protein 216, humanhuman

TSL 3

Gene TMEM216, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM216-204ENST00000541473 DPEP3Q9H4B8 488 aa13.17□□□□□ -0.3
TMEM216-204ENST00000541473 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
TMEM216-204ENST00000541473 SLC8A2Q9UPR5 921 aa13.17□□□□□ -0.3
TMEM216-204ENST00000541473 PTPRZ1P23471 2315 aaPredicted RBP13.17□□□□□ -0.3
TMEM216-204ENST00000541473 C2orf78A6NCI8 922 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 KLRC4O43908 158 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 TADA3O75528 432 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 NFATC1O95644 943 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 STAU1O95793 577 aaKnown RBP13.16□□□□□ -0.3
TMEM216-204ENST00000541473 FAM163BP0C2L3 166 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 ARSAP15289 507 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 NR2F2P24468 414 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 PPP3CCP48454 512 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 FZD5Q13467 585 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 SGSM1Q2NKQ1 1148 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 GPR161Q8N6U8 529 aaKnown RBP13.16□□□□□ -0.3
TMEM216-204ENST00000541473 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 OSCP1Q8WVF1 389 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 FBXO32Q969P5 355 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 CYP2S1Q96SQ9 504 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 ZNF518BQ9C0D4 1074 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 WNT6Q9Y6F9 365 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 KIAA1549LQ6ZVL6 1849 aa13.16□□□□□ -0.3
TMEM216-204ENST00000541473 USP34Q70CQ2 3546 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 SHISA7A6NL88 538 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 CHURC1-FNTBB4DL54 471 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 CLDN5O00501 218 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 RTN3O95197 1032 aaPredicted RBP13.15□□□□□ -0.3
TMEM216-204ENST00000541473 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 MBL2P11226 248 aaPredicted RBP13.15□□□□□ -0.3
TMEM216-204ENST00000541473 FNTBP49356 437 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 VAMP7P51809 220 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 CDH8P55286 799 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 USP4Q13107 963 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 SIM2Q14190 667 aaPredicted RBP13.15□□□□□ -0.3
TMEM216-204ENST00000541473 ZNF77Q15935 545 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 KRBA2Q6ZNG9 492 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 INTS8Q75QN2 995 aaKnown RBP13.15□□□□□ -0.3
TMEM216-204ENST00000541473 SLC9A9Q8IVB4 645 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 NUP93Q8N1F7 819 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 DCLK2Q8N568 766 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 PDZD8Q8NEN9 1154 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 ZNF516Q92618 1163 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 CHAMP1Q96JM3 812 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 P2RY13Q9BPV8 354 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 FAM83CQ9BQN1 747 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 EPC1Q9H2F5 836 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 DMAP1Q9NPF5 467 aaPredicted RBP13.15□□□□□ -0.3
TMEM216-204ENST00000541473 HPS4Q9NQG7 708 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM216-204ENST00000541473 KRT82Q9NSB4 513 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 RMND1Q9NWS8 449 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 SMPD4Q9NXE4 827 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 HOOK1Q9UJC3 728 aaKnown RBP13.15□□□□□ -0.3
TMEM216-204ENST00000541473 HPSEQ9Y251 543 aa13.15□□□□□ -0.3
TMEM216-204ENST00000541473 RIF1Q5UIP0 2472 aaKnown RBP13.15□□□□□ -0.3
TMEM216-204ENST00000541473 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 SLC9A3R1O14745 358 aaPredicted RBP13.14□□□□□ -0.31
TMEM216-204ENST00000541473 AP1G2O75843 785 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 RHOBTB3O94955 611 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 PFKLP17858 780 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 DRD1P21728 446 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 YWHAQP27348 245 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 NOP14P78316 857 aaKnown RBP13.14□□□□□ -0.31
TMEM216-204ENST00000541473 TAF10Q12962 218 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 ACOT1Q86TX2 421 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 FAM35AQ86V20 835 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 DDX42Q86XP3 938 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMEM216-204ENST00000541473 FAM186BQ8IYM0 893 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 SUMF1Q8NBK3 374 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 CCDC26Q8TAB7 109 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 TAF4BQ92750 862 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 CD101Q93033 1021 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 TSG101Q99816 390 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 KCTD10Q9H3F6 313 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 ECT2Q9H8V3 914 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 ARHGAP26Q9UNA1 814 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 CPQQ9Y646 472 aa13.14□□□□□ -0.31
TMEM216-204ENST00000541473 LEFTY2O00292 366 aa13.13□□□□□ -0.31
TMEM216-204ENST00000541473 LILRB5O75023 590 aa13.13□□□□□ -0.31
TMEM216-204ENST00000541473 RNF40O75150 1001 aa13.13□□□□□ -0.31
TMEM216-204ENST00000541473 ZNF202O95125 648 aa13.13□□□□□ -0.31
TMEM216-204ENST00000541473 HLA-DRAP01903 254 aa13.13□□□□□ -0.31
TMEM216-204ENST00000541473 C4BPAP04003 597 aaKnown RBP13.13□□□□□ -0.31
TMEM216-204ENST00000541473 EPB41P11171 864 aaKnown RBP13.13□□□□□ -0.31
TMEM216-204ENST00000541473 CNR2P34972 360 aa13.13□□□□□ -0.31
TMEM216-204ENST00000541473 GJA4P35212 333 aa13.13□□□□□ -0.31
TMEM216-204ENST00000541473 PSMC2P35998 433 aaKnown RBP13.13□□□□□ -0.31
TMEM216-204ENST00000541473 USP46P62068 366 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms