RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 HNRNPLLQ8WVV9 542 aaKnown RBP12.68□□□□□ -0.38
COPA-205ENST00000541366 ERLEC1Q96DZ1 483 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 TRMT2BQ96GJ1 504 aaKnown RBP12.68□□□□□ -0.38
COPA-205ENST00000541366 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 PKMYT1Q99640 499 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 REEP2Q9BRK0 252 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 CCSER1Q9C0I3 900 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 CAPN10Q9HC96 672 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 LARSQ9P2J5 1176 aaKnown RBP12.68□□□□□ -0.38
COPA-205ENST00000541366 UXTQ9UBK9 157 aaPredicted RBP12.68□□□□□ -0.38
COPA-205ENST00000541366 SLC6A14Q9UN76 642 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 DERAQ9Y315 318 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 PLXND1Q9Y4D7 1925 aa12.68□□□□□ -0.38
COPA-205ENST00000541366 TCRBV21S2A2A0A5A6 115 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 LEFTY2O00292 366 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 SH3BP5O60239 455 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 OPHN1O60890 802 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 ANAPC15P60006 121 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 USP46P62068 366 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
COPA-205ENST00000541366 ATP2C1P98194 919 aaPredicted RBP12.67□□□□□ -0.38
COPA-205ENST00000541366 KDSRQ06136 332 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
COPA-205ENST00000541366 KCNB1Q14721 858 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 NFE2Q16621 373 aaPredicted RBP12.67□□□□□ -0.38
COPA-205ENST00000541366 DUOXA1Q1HG43 343 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 SV2CQ496J9 727 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 HYIQ5T013 277 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 PEAR1Q5VY43 1037 aaPredicted RBP12.67□□□□□ -0.38
COPA-205ENST00000541366 ADALQ6DHV7 355 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 DTHD1Q6ZMT9 781 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 MYCT1Q8N699 235 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 ZSWIM2Q8NEG5 633 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 CCDC26Q8TAB7 109 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
COPA-205ENST00000541366 KCNG1Q9UIX4 513 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 ARHGAP26Q9UNA1 814 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 C2CD2Q9Y426 696 aa12.67□□□□□ -0.38
COPA-205ENST00000541366 ASH1LQ9NR48 2969 aaKnown RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 H0YCG3 227 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 KAT7O95251 611 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 SERPINF2P08697 491 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 POLR2BP30876 1174 aaKnown RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 KIR2DL1P43626 348 aaPredicted RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 RPL6Q02878 288 aaKnown RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 DHCR24Q15392 516 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 TRIP6Q15654 476 aaKnown RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 ZNF423Q2M1K9 1284 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 INTS6LQ5JSJ4 861 aaKnown RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 RHBDF2Q6PJF5 856 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 CRELD2Q6UXH1 353 aaPredicted RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 ADGRG2Q8IZP9 1017 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 FIZ1Q96SL8 496 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 PNKPQ96T60 521 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 RNF38Q9H0F5 515 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 ASB7Q9H672 318 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 POLMQ9NP87 494 aaPredicted RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 SMPD4Q9NXE4 827 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 RAXQ9Y2V3 346 aa12.66□□□□□ -0.38
COPA-205ENST00000541366 GOLGA4Q13439 2230 aaKnown RBP12.66□□□□□ -0.38
COPA-205ENST00000541366 MYMKA6NI61 221 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 ATP2C2O75185 946 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 FAM13AO94988 1023 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 FTH1P19P0C7X4 201 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 TCF3P15923 654 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 RDXP35241 583 aaKnown RBP12.65□□□□□ -0.38
COPA-205ENST00000541366 PRPHP41219 470 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 WASP42768 502 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 ZNF33AQ06730 810 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 RESTQ13127 1097 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 TMEM119Q4V9L6 283 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 EOGTQ5NDL2 527 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 CCNI2Q6ZMN8 369 aaPredicted RBP12.65□□□□□ -0.38
COPA-205ENST00000541366 GPBP1Q86WP2 473 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 MARCH9Q86YJ5 346 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 SPATA2LQ8IUW3 424 aaPredicted RBP12.65□□□□□ -0.38
COPA-205ENST00000541366 SLC41A1Q8IVJ1 513 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 FSIP1Q8NA03 581 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 KCNN1Q92952 543 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 CRELD1Q96HD1 420 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 LRIG1Q96JA1 1093 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 ACBD6Q9BR61 282 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 ZHX3Q9H4I2 956 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 CCDC86Q9H6F5 360 aaKnown RBP12.65□□□□□ -0.38
COPA-205ENST00000541366 ABCB6Q9NP58 842 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 CD93Q9NPY3 652 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 ARHGEF4Q9NR80 690 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.65□□□□□ -0.38
COPA-205ENST00000541366 AGO2Q9UKV8 859 aaKnown RBP12.65□□□□□ -0.38
COPA-205ENST00000541366 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
COPA-205ENST00000541366 PTPRBP23467 1997 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 VWA3AA6NCI4 1184 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 TRAK2O60296 914 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 GJB3O75712 270 aa12.64□□□□□ -0.39
COPA-205ENST00000541366 APODP05090 189 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms