RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 RPL34P49207 117 aaKnown RBP14.46□□□□□ -0.1
RTN3-210ENST00000540798 MORF4L2Q15014 288 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 KYNUQ16719 465 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 ZFYVE27Q5T4F4 411 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 OLFML1Q6UWY5 402 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 FAM43BQ6ZT52 329 aaPredicted RBP14.46□□□□□ -0.1
RTN3-210ENST00000540798 STK32AQ8WU08 396 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 SLC35F5Q8WV83 523 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 ATXN2LQ8WWM7 1075 aaKnown RBP14.46□□□□□ -0.1
RTN3-210ENST00000540798 KHSRPQ92945 711 aaKnown RBP eCLIP14.46□□□□□ -0.12e-6■■□□□ 11.6
RTN3-210ENST00000540798 PIWIL1Q96J94 861 aaKnown RBP14.46□□□□□ -0.1
RTN3-210ENST00000540798 RABEP2Q9H5N1 569 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 EURLQ9NYK6 297 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 LGALS13Q9UHV8 139 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 GGA2Q9UJY4 613 aa14.46□□□□□ -0.1
RTN3-210ENST00000540798 TPX2Q9ULW0 747 aaKnown RBP14.46□□□□□ -0.1
RTN3-210ENST00000540798 TLDC2A0PJX2 215 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 EBAG9O00559 213 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 ZSCAN5DPP0CG00 497 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 KCNE1P15382 129 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 CCL14Q16627 93 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 SOWAHAQ2M3V2 549 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 DNAJB3Q8WWF6 145 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 UBQLN1Q9UMX0 589 aaKnown RBP14.45□□□□□ -0.1
RTN3-210ENST00000540798 FARP1Q9Y4F1 1045 aaPredicted RBP14.45□□□□□ -0.1
RTN3-210ENST00000540798 HES2Q9Y543 173 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 SNX9Q9Y5X1 595 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 GABBR2O75899 941 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 RNF8O76064 485 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 ETS1P14921 441 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 OTUD4Q01804 1114 aaKnown RBP14.45□□□□□ -0.1
RTN3-210ENST00000540798 PMF1Q6P1K2 205 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 ACTL9Q8TC94 416 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 PHACTR1Q9C0D0 580 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 CCDC134Q9H6E4 229 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 GDAP2Q9NXN4 497 aa14.45□□□□□ -0.1
RTN3-210ENST00000540798 MANSC4A6NHS7 340 aaPredicted RBP14.44□□□□□ -0.1
RTN3-210ENST00000540798 TREHO43280 583 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 CST8O60676 142 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 TAF5Q15542 800 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 LONRF1Q17RB8 773 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 EXOC3L1Q86VI1 746 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 SPATS2Q86XZ4 545 aaKnown RBP14.44□□□□□ -0.1
RTN3-210ENST00000540798 PPP1R13LQ8WUF5 828 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 KBTBD7Q8WVZ9 684 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 RXFP2Q8WXD0 754 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 TMEM121Q9BTD3 319 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 SHOC2Q9UQ13 582 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 E7EVH7 732 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 APOC4-APOC2K7ER74 178 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 APOC2P02655 101 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 SLCO1A2P46721 670 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 CDR1P51861 262 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 CCDC14Q49A88 953 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 B4GALNT4Q76KP1 1039 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 ACOT1Q86TX2 421 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 NME8Q8N427 588 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 MDM1Q8TC05 714 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 HAUS1Q96CS2 278 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 XPO6Q96QU8 1125 aaKnown RBP14.44□□□□□ -0.1
RTN3-210ENST00000540798 RBM15Q96T37 977 aaKnown RBP eCLIP14.44□□□□□ -0.14e-7■■■□□ 16.7
RTN3-210ENST00000540798 PPANQ9NQ55 473 aaKnown RBP14.44□□□□□ -0.1
RTN3-210ENST00000540798 GINS2Q9Y248 185 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 SMIM28A0A1B0GU29 152 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 CAPN15O75808 1086 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 CD4P01730 458 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 CHN1P15882 459 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 YY1P25490 414 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 MAGEA4P43358 317 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 CRYBB1P53674 252 aaPredicted RBP14.44□□□□□ -0.1
RTN3-210ENST00000540798 CORO7P57737 925 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 GPS1Q13098 491 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 SKIDA1Q1XH10 827 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 SH3PXD2AQ5TCZ1 1133 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 VSIG1Q86XK7 387 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 ZDHHC17Q8IUH5 632 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 CRYBG2Q8N1P7 616 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 PRCCQ92733 491 aaPredicted RBP14.44□□□□□ -0.1
RTN3-210ENST00000540798 RSAD1Q9HA92 442 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 DNAJC17Q9NVM6 304 aaKnown RBP14.44□□□□□ -0.1
RTN3-210ENST00000540798 PCSK1NQ9UHG2 260 aa14.44□□□□□ -0.1
RTN3-210ENST00000540798 SMIM23A6NLE4 172 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 PECAM1P16284 738 aaPredicted RBP14.43□□□□□ -0.1
RTN3-210ENST00000540798 HUNKP57058 714 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 OR6B2Q6IFH4 312 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 KCTD6Q8NC69 237 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 KATNAL1Q9BW62 490 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 PDGFRAP16234 1089 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 GDF10P55107 478 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 ZNF200P98182 395 aaPredicted RBP14.43□□□□□ -0.1
RTN3-210ENST00000540798 SLC6A3Q01959 620 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 STAT4Q14765 748 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 RAB6CQ53S08 254 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 GLRA4Q5JXX5 417 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 TAOK1Q7L7X3 1001 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 TEKT4Q8WW24 435 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 ZNF317Q96PQ6 595 aaPredicted RBP14.43□□□□□ -0.1
RTN3-210ENST00000540798 APBA2Q99767 749 aa14.43□□□□□ -0.1
RTN3-210ENST00000540798 C11orf84Q9BUA3 381 aaPredicted RBP14.43□□□□□ -0.1
RTN3-210ENST00000540798 RAB6CQ9H0N0 254 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms