RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CLCN1P35523 988 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 STAT1P42224 750 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 EPHA5P54756 1037 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 MTMR3Q13615 1198 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 DENND5BQ6ZUT9 1274 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 UBA3Q8TBC4 463 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 ZNF606Q8WXB4 792 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 NUP58Q9BVL2 599 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 LRRC3Q9BY71 257 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 GPR88Q9GZN0 384 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.4■□□□□ 0.22
DDB1-218ENST00000540784 UXTQ9UBK9 157 aaPredicted RBP16.4■□□□□ 0.22
DDB1-218ENST00000540784 CLUHO75153 1309 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 COL6A3P12111 3177 aa16.4■□□□□ 0.22
DDB1-218ENST00000540784 F8VZ95 297 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 MICAL2O94851 1124 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 RTN3O95197 1032 aaPredicted RBP16.39■□□□□ 0.21
DDB1-218ENST00000540784 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
DDB1-218ENST00000540784 SOX5P35711 763 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 OTOP3Q7RTS5 596 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 STKLD1Q8NE28 680 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 ZMIZ2Q8NF64 920 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 ITFG1Q8TB96 612 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 ACSF2Q96CM8 615 aaPredicted RBP16.39■□□□□ 0.21
DDB1-218ENST00000540784 RPGRIP1Q96KN7 1286 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 MYRFLQ96LU7 910 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 ZSWIM1Q9BR11 485 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 ZNF334Q9HCZ1 680 aaPredicted RBP16.39■□□□□ 0.21
DDB1-218ENST00000540784 ACP6Q9NPH0 428 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 COMMD8Q9NX08 183 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 PRKAG3Q9UGI9 489 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.39■□□□□ 0.21
DDB1-218ENST00000540784 NR2E1Q9Y466 385 aa16.39■□□□□ 0.21
DDB1-218ENST00000540784 TNFRSF10BO14763 440 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 GFPT2O94808 682 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 SLC34A2O95436 690 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 YWHAQP27348 245 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 GABRR2P28476 465 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 GBP2P32456 591 aaPredicted RBP16.38■□□□□ 0.21
DDB1-218ENST00000540784 SSTR3P32745 418 aaPredicted RBP16.38■□□□□ 0.21
DDB1-218ENST00000540784 KRT9P35527 623 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 PBX1P40424 430 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 BCAT1P54687 386 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 JAM2P57087 298 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 PDE4CQ08493 712 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 BST2Q10589 180 aaKnown RBP16.38■□□□□ 0.21
DDB1-218ENST00000540784 TJAP1Q5JTD0 557 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 PRSS36Q5K4E3 855 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 SLC47A2Q86VL8 602 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 TTC30AQ86WT1 665 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 TMC8Q8IU68 726 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 TCEAL4Q96EI5 215 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 TRMT2BQ96GJ1 504 aaKnown RBP16.38■□□□□ 0.21
DDB1-218ENST00000540784 GCNAQ96QF7 691 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 ATXN3LQ9H3M9 355 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 USTQ9Y2C2 406 aa16.38■□□□□ 0.21
DDB1-218ENST00000540784 PRUNE2Q8WUY3 3088 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 A0A1W2PRU2 124 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 M0QYV0 167 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 F11P03951 625 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 SETSIPP0DME0 302 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 CYP11B1P15538 503 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 CDC25CP30307 473 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 CCR2P41597 374 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 USP46P62068 366 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 IFRD2Q12894 506 aaPredicted RBP16.37■□□□□ 0.21
DDB1-218ENST00000540784 SLC5A9Q2M3M2 681 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 GAREM2Q75VX8 874 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 GET4Q7L5D6 327 aaPredicted RBP16.37■□□□□ 0.21
DDB1-218ENST00000540784 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 ADHFE1Q8IWW8 467 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 SCAMP5Q8TAC9 235 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 TTLL2Q9BWV7 592 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 TRIM5Q9C035 493 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 FBXO44Q9H4M3 255 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 IL21Q9HBE4 155 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 PNPLA8Q9NP80 782 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 IL37Q9NZH6 218 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 CDH7Q9ULB5 785 aa16.37■□□□□ 0.21
DDB1-218ENST00000540784 ZFP37Q9Y6Q3 630 aaPredicted RBP16.37■□□□□ 0.21
DDB1-218ENST00000540784 BRWD1Q9NSI6 2320 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 XIRP2A4UGR9 3374 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 HHLA1C9JL84 531 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 XPO1O14980 1071 aaKnown RBP16.36■□□□□ 0.21
DDB1-218ENST00000540784 CCDC172P0C7W6 258 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 GJA1P17302 382 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 SP100P23497 879 aaPredicted RBP16.36■□□□□ 0.21
DDB1-218ENST00000540784 PPP3CCP48454 512 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 SLC5A3P53794 718 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 ARID5AQ03989 594 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 TAF10Q12962 218 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 TEAD2Q15562 447 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 PKDCCQ504Y2 493 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 ARHGAP15Q53QZ3 475 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 DENND1BQ6P3S1 775 aa16.36■□□□□ 0.21
DDB1-218ENST00000540784 SARM1Q6SZW1 724 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms